RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 MKKSQ9NPJ1 570 aaPredicted RBP13.75□□□□□ -0.21
SCFD2-201ENST00000388940 PRTFDC1Q9NRG1 225 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 WSB2Q9NYS7 404 aaPredicted RBP13.75□□□□□ -0.21
SCFD2-201ENST00000388940 RPS6KB2Q9UBS0 482 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 MALT1Q9UDY8 824 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 CYP8B1Q9UNU6 501 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 ANKRD34BA5PLL1 514 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 FAM25AB3EWG3 89 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 FAM25CB3EWG5 89 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 FAM25GB3EWG6 89 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 J3QLW9 94 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 CLDN4O14493 209 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 LYRM1O43325 122 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 PPM1BO75688 479 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 NSA2O95478 260 aaKnown RBP13.75□□□□□ -0.21
SCFD2-201ENST00000388940 CSF2P04141 144 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 ZNF19P17023 458 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 OR12D2P58182 307 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 E2F1Q01094 437 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 FUT7Q11130 342 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 ZFP69Q49AA0 526 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 KIRREL2Q6UWL6 708 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 CEACAM19Q7Z692 300 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 PARGQ86W56 976 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 POMGNT2Q8NAT1 580 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 SGTBQ96EQ0 304 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 KLHDC7BQ96G42 594 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 PEX11GQ96HA9 241 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 ZNF285Q96NJ3 590 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 DGAT2Q96PD7 388 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 ERMAPQ96PL5 475 aaPredicted RBP13.75□□□□□ -0.21
SCFD2-201ENST00000388940 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.75□□□□□ -0.21
SCFD2-201ENST00000388940 UCK1Q9HA47 277 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 HCN3Q9P1Z3 774 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 FBXL4Q9UKA2 621 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 DTX4Q9Y2E6 619 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 RBMX2Q9Y388 322 aaKnown RBP13.75□□□□□ -0.21
SCFD2-201ENST00000388940 A0A087WUJ7 227 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 A0A0B4J293 547 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 A0A1W2PPC4 97 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 FAM172BPA6NC97 362 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 CENPXA8MT69 81 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 HRKO00198 91 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 OGG1O15527 345 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 TRIM3O75382 744 aaPredicted RBP13.74□□□□□ -0.21
SCFD2-201ENST00000388940 OR2T7P0C7T2 308 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 CT45A8P0DMV1 189 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 CT45A9P0DMV2 189 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 GALNSP34059 522 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 ZNF267Q14586 743 aaPredicted RBP13.74□□□□□ -0.21
SCFD2-201ENST00000388940 CT45A2Q5DJT8 189 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 PAMR1Q6UXH9 720 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 SYS1Q8N2H4 156 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 OR52E2Q8NGJ4 325 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 OR2T27Q8NH04 317 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 RNF31Q96EP0 1072 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 SPACA7Q96KW9 195 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 ORAI3Q9BRQ5 295 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 LRRC61Q9BV99 259 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 RBCK1Q9BYM8 510 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 EXTL2Q9UBQ6 330 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 ST6GALNAC2Q9UJ37 374 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 A0A0G2JK05 382 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 SERINC4A6NH21 518 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 B4DGG1 531 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 ZNF749O43361 778 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 CD1AP06126 327 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 CSTF1Q05048 431 aaKnown RBP13.74□□□□□ -0.21
SCFD2-201ENST00000388940 SLC3A1Q07837 685 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 MADCAM1Q13477 382 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.74□□□□□ -0.21
SCFD2-201ENST00000388940 ISXQ2M1V0 245 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 SFXN4Q6P4A7 337 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 BPHLQ86WA6 291 aaPredicted RBP13.74□□□□□ -0.21
SCFD2-201ENST00000388940 CADM2Q8N3J6 435 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 C17orf47Q8NEP4 570 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 OIT3Q8WWZ8 545 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 MSANTD3Q96H12 275 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 CCNL2Q96S94 520 aaPredicted RBP13.74□□□□□ -0.21
SCFD2-201ENST00000388940 GPR174Q9BXC1 333 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 ENAMQ9NRM1 1142 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 DDX28Q9NUL7 540 aaKnown RBP13.74□□□□□ -0.21
SCFD2-201ENST00000388940 NPFFR2Q9Y5X5 522 aa13.74□□□□□ -0.21
SCFD2-201ENST00000388940 SERPINA3P01011 423 aa13.73□□□□□ -0.21
SCFD2-201ENST00000388940 NPR2P20594 1047 aa13.73□□□□□ -0.21
SCFD2-201ENST00000388940 RBMS1P29558 406 aaKnown RBP13.73□□□□□ -0.21
SCFD2-201ENST00000388940 FASLGP48023 281 aa13.73□□□□□ -0.21
SCFD2-201ENST00000388940 GABRA4P48169 554 aa13.73□□□□□ -0.21
SCFD2-201ENST00000388940 CLDN20P56880 219 aa13.73□□□□□ -0.21
SCFD2-201ENST00000388940 HSD17B7P56937 341 aa13.73□□□□□ -0.21
SCFD2-201ENST00000388940 ACTA2P62736 377 aa13.73□□□□□ -0.21
SCFD2-201ENST00000388940 ACTG2P63267 376 aa13.73□□□□□ -0.21
SCFD2-201ENST00000388940 BIKQ13323 160 aa13.73□□□□□ -0.21
SCFD2-201ENST00000388940 DPY19L2P2Q6ZN68 376 aa13.73□□□□□ -0.21
SCFD2-201ENST00000388940 ZNF440Q8IYI8 595 aa13.73□□□□□ -0.21
SCFD2-201ENST00000388940 BCORP1Q8N888 145 aa13.73□□□□□ -0.21
SCFD2-201ENST00000388940 GDF15Q99988 308 aa13.73□□□□□ -0.21
SCFD2-201ENST00000388940 MARVELD1Q9BSK0 173 aa13.73□□□□□ -0.21
SCFD2-201ENST00000388940 MFRPQ9BY79 579 aa13.73□□□□□ -0.21
SCFD2-201ENST00000388940 SLC19A3Q9BZV2 496 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms