RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 ZC3H14Q6PJT7 736 aaKnown RBP15.04■□□□□ -0
VPS16-203ENST00000380469 GRAMD2AQ8IUY3 354 aa15.04■□□□□ -0
VPS16-203ENST00000380469 SHISA5Q8N114 240 aa15.04■□□□□ -0
VPS16-203ENST00000380469 CSNK1A1LQ8N752 337 aa15.04■□□□□ -0
VPS16-203ENST00000380469 OR13C5Q8NGS8 318 aa15.04■□□□□ -0
VPS16-203ENST00000380469 OR2T27Q8NH04 317 aa15.04■□□□□ -0
VPS16-203ENST00000380469 ZMYND19Q96E35 227 aaPredicted RBP15.04■□□□□ -0
VPS16-203ENST00000380469 CNN2Q99439 309 aaKnown RBP15.04■□□□□ -0
VPS16-203ENST00000380469 BRD7Q9NPI1 651 aa15.04■□□□□ -0
VPS16-203ENST00000380469 RPS6KB2Q9UBS0 482 aa15.04■□□□□ -0
VPS16-203ENST00000380469 SERTAD3Q9UJW9 196 aa15.04■□□□□ -0
VPS16-203ENST00000380469 MRPS7Q9Y2R9 242 aaKnown RBP15.04■□□□□ -0
VPS16-203ENST00000380469 ENTPD2Q9Y5L3 495 aa15.04■□□□□ -0
VPS16-203ENST00000380469 A0A1W2PPK0 400 aa15.04■□□□□ -0
VPS16-203ENST00000380469 A0A1W2PQF6 199 aa15.04■□□□□ -0
VPS16-203ENST00000380469 TNFRSF10CO14798 259 aa15.04■□□□□ -0
VPS16-203ENST00000380469 FABP7O15540 132 aa15.04■□□□□ -0
VPS16-203ENST00000380469 GDI2P50395 445 aaKnown RBP15.04■□□□□ -0
VPS16-203ENST00000380469 EMDP50402 254 aa15.04■□□□□ -0
VPS16-203ENST00000380469 HCCSP53701 268 aa15.04■□□□□ -0
VPS16-203ENST00000380469 FBXO46Q6PJ61 603 aaPredicted RBP15.04■□□□□ -0
VPS16-203ENST00000380469 LYPD4Q6UWN0 246 aa15.04■□□□□ -0
VPS16-203ENST00000380469 POMGNT2Q8NAT1 580 aa15.04■□□□□ -0
VPS16-203ENST00000380469 OR5H6Q8NGV6 325 aa15.04■□□□□ -0
VPS16-203ENST00000380469 OR4K13Q8NH42 304 aa15.04■□□□□ -0
VPS16-203ENST00000380469 ANKRD9Q96BM1 317 aaPredicted RBP15.04■□□□□ -0
VPS16-203ENST00000380469 LRFN5Q96NI6 719 aa15.04■□□□□ -0
VPS16-203ENST00000380469 ZFP3Q96NJ6 502 aa15.04■□□□□ -0
VPS16-203ENST00000380469 RPP25Q9BUL9 199 aaKnown RBP15.04■□□□□ -0
VPS16-203ENST00000380469 ZNF426Q9BUY5 554 aa15.04■□□□□ -0
VPS16-203ENST00000380469 TTTY10Q9BZA0 68 aa15.04■□□□□ -0
VPS16-203ENST00000380469 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.04■□□□□ -0
VPS16-203ENST00000380469 C7orf66A4D0T2 115 aa15.03■□□□□ -0
VPS16-203ENST00000380469 ERVH48-1M5A8F1 160 aa15.03■□□□□ -0
VPS16-203ENST00000380469 NDUFB2O95178 105 aa15.03■□□□□ -0
VPS16-203ENST00000380469 KLF8O95600 359 aaPredicted RBP15.03■□□□□ -0
VPS16-203ENST00000380469 CBX7O95931 251 aa15.03■□□□□ -0
VPS16-203ENST00000380469 TCRBP04435 133 aa15.03■□□□□ -0
VPS16-203ENST00000380469 SLC35E2P0CK97 266 aa15.03■□□□□ -0
VPS16-203ENST00000380469 EPXP11678 715 aa15.03■□□□□ -0
VPS16-203ENST00000380469 ACAA2P42765 397 aaKnown RBP15.03■□□□□ -0
VPS16-203ENST00000380469 MMP15P51511 669 aa15.03■□□□□ -0
VPS16-203ENST00000380469 LGALS3BPQ08380 585 aa15.03■□□□□ -0
VPS16-203ENST00000380469 ANKRD54Q6NXT1 300 aa15.03■□□□□ -0
VPS16-203ENST00000380469 SYS1Q8N2H4 156 aa15.03■□□□□ -0
VPS16-203ENST00000380469 ARL14Q8N4G2 192 aa15.03■□□□□ -0
VPS16-203ENST00000380469 SDR9C7Q8NEX9 313 aa15.03■□□□□ -0
VPS16-203ENST00000380469 SNX33Q8WV41 574 aa15.03■□□□□ -0
VPS16-203ENST00000380469 SMIM19Q96E16 107 aa15.03■□□□□ -0
VPS16-203ENST00000380469 SCMH1Q96GD3 660 aa15.03■□□□□ -0
VPS16-203ENST00000380469 CCDC3Q9BQI4 270 aa15.03■□□□□ -0
VPS16-203ENST00000380469 DNAJB12Q9NXW2 375 aaKnown RBP15.03■□□□□ -0
VPS16-203ENST00000380469 COPZ2Q9P299 210 aa15.03■□□□□ -0
VPS16-203ENST00000380469 ZNF222Q9UK12 451 aa15.03■□□□□ -0
VPS16-203ENST00000380469 TEX13CA0A0J9YWL9 993 aa15.03■□□□□ -0
VPS16-203ENST00000380469 LRRN3E7EW58 273 aa15.03■□□□□ -0
VPS16-203ENST00000380469 NGFRP08138 427 aa15.03■□□□□ -0
VPS16-203ENST00000380469 CD3GP09693 182 aa15.03■□□□□ -0
VPS16-203ENST00000380469 SNRPBP14678 240 aaKnown RBP15.03■□□□□ -0
VPS16-203ENST00000380469 HIST1H1CP16403 213 aaKnown RBP15.03■□□□□ -0
VPS16-203ENST00000380469 LSSP48449 732 aa15.03■□□□□ -0
VPS16-203ENST00000380469 VSX2P58304 361 aaPredicted RBP15.03■□□□□ -0
VPS16-203ENST00000380469 SIRPAP78324 504 aa15.03■□□□□ -0
VPS16-203ENST00000380469 CLPPQ16740 277 aaPredicted RBP15.03■□□□□ -0
VPS16-203ENST00000380469 CCDC58Q4VC31 144 aa15.03■□□□□ -0
VPS16-203ENST00000380469 ULK3Q6PHR2 472 aa15.03■□□□□ -0
VPS16-203ENST00000380469 BAIAP2L2Q6UXY1 529 aa15.03■□□□□ -0
VPS16-203ENST00000380469 RNF44Q7L0R7 432 aa15.03■□□□□ -0
VPS16-203ENST00000380469 ZNF550Q7Z398 422 aa15.03■□□□□ -0
VPS16-203ENST00000380469 LSMEM1Q8N8F7 131 aa15.03■□□□□ -0
VPS16-203ENST00000380469 YIPF5Q969M3 257 aa15.03■□□□□ -0
VPS16-203ENST00000380469 MRPL48Q96GC5 212 aaKnown RBP15.03■□□□□ -0
VPS16-203ENST00000380469 SMAD5Q99717 465 aaKnown RBP15.03■□□□□ -0
VPS16-203ENST00000380469 GHITMQ9H3K2 345 aa15.03■□□□□ -0
VPS16-203ENST00000380469 LRRN3Q9H3W5 708 aa15.03■□□□□ -0
VPS16-203ENST00000380469 RANBP3Q9H6Z4 567 aaPredicted RBP15.03■□□□□ -0
VPS16-203ENST00000380469 EMC7Q9NPA0 242 aa15.03■□□□□ -0
VPS16-203ENST00000380469 HRASLS2Q9NWW9 162 aa15.03■□□□□ -0
VPS16-203ENST00000380469 A0A0J9YY10 115 aa15.02■□□□□ -0
VPS16-203ENST00000380469 GATBO75879 557 aaKnown RBP15.02■□□□□ -0
VPS16-203ENST00000380469 ATF1P18846 271 aa15.02■□□□□ -0
VPS16-203ENST00000380469 HNRNPA2B1P22626 353 aaKnown RBP15.02■□□□□ -0
VPS16-203ENST00000380469 RAB38P57729 211 aa15.02■□□□□ -0
VPS16-203ENST00000380469 FHL1Q13642 323 aa15.02■□□□□ -0
VPS16-203ENST00000380469 CDK5R1Q15078 307 aa15.02■□□□□ -0
VPS16-203ENST00000380469 RNASE12Q5GAN4 147 aaKnown RBP15.02■□□□□ -0
VPS16-203ENST00000380469 UBE2Q1Q7Z7E8 422 aa15.02■□□□□ -0
VPS16-203ENST00000380469 SIAH3Q8IW03 269 aa15.02■□□□□ -0
VPS16-203ENST00000380469 SLC35F2Q8IXU6 374 aa15.02■□□□□ -0
VPS16-203ENST00000380469 RFLNBQ8N5W9 214 aa15.02■□□□□ -0
VPS16-203ENST00000380469 PELI1Q96FA3 418 aa15.02■□□□□ -0
VPS16-203ENST00000380469 OR2M2Q96R28 347 aa15.02■□□□□ -0
VPS16-203ENST00000380469 TMEM106CQ9BVX2 250 aa15.02■□□□□ -0
VPS16-203ENST00000380469 CACNG6Q9BXT2 260 aa15.02■□□□□ -0
VPS16-203ENST00000380469 OR51J1Q9H342 316 aa15.02■□□□□ -0
VPS16-203ENST00000380469 ZCCHC4Q9H5U6 513 aa15.02■□□□□ -0
VPS16-203ENST00000380469 MKKSQ9NPJ1 570 aaPredicted RBP15.02■□□□□ -0
VPS16-203ENST00000380469 STARD5Q9NSY2 213 aa15.02■□□□□ -0
VPS16-203ENST00000380469 EVA1BQ9NVM1 165 aa15.02■□□□□ -0
VPS16-203ENST00000380469 CHRNA9Q9UGM1 479 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms