RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 TBL1XR1Q9BZK7 514 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 SLC19A3Q9BZV2 496 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 OR51V1Q9H2C8 321 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 SPIN1Q9Y657 262 aaPredicted RBP13.76□□□□□ -0.21
SNX2-201ENST00000379516 IGKV1D-42A0A075B6H8 117 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 SAGE2PA6NJ88 616 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 GDF9O60383 454 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 TSPAN19P0C672 248 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 ENDOUP21128 410 aaKnown RBP13.76□□□□□ -0.21
SNX2-201ENST00000379516 SLC16A1P53985 500 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 RPS7P62081 194 aaKnown RBP13.76□□□□□ -0.21
SNX2-201ENST00000379516 ITGADQ13349 1161 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 CRMP1Q14194 572 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 ANKDD1AQ495B1 522 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 ZNF362Q5T0B9 420 aaPredicted RBP13.76□□□□□ -0.21
SNX2-201ENST00000379516 LCN10Q6JVE6 187 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 LINC00299Q6ZSB3 139 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 IGFN1Q86VF2 1251 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 SIRT6Q8N6T7 355 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 CYB561A3Q8NBI2 242 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 PSD4Q8NDX1 1056 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 C17orf47Q8NEP4 570 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 OR5M3Q8NGP4 307 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 TM9SF4Q92544 642 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 DEPDC7Q96QD5 511 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 NDUFB11Q9NX14 153 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 SEC14L4Q9UDX3 406 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 ZNF337Q9Y3M9 751 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 CORINQ9Y5Q5 1042 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 ZDBF2Q9HCK1 2354 aa13.76□□□□□ -0.21
SNX2-201ENST00000379516 PNMA8CA0A1B0GUJ8 204 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 VSTM2BA6NLU5 285 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 C17orf51A8MQB3 221 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 ALG1L2C9J202 215 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 NTN3O00634 580 aaPredicted RBP13.75□□□□□ -0.21
SNX2-201ENST00000379516 KHNYNO15037 678 aaKnown RBP13.75□□□□□ -0.21
SNX2-201ENST00000379516 OR7A10O76100 309 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 CPEP16870 476 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 MST1P26927 711 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 ITPKBP27987 946 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 CD79BP40259 229 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 CRYBB2P43320 205 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 SLC6A8P48029 635 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 CLPPQ16740 277 aaPredicted RBP13.75□□□□□ -0.21
SNX2-201ENST00000379516 ZNF404Q494X3 552 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 ARHGAP11AQ6P4F7 1023 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 C16orf87Q6PH81 154 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 C16orf47Q6ZP98 133 aaPredicted RBP13.75□□□□□ -0.21
SNX2-201ENST00000379516 APCDD1LQ8NCL9 501 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 NFAM1Q8NET5 270 aaPredicted RBP13.75□□□□□ -0.21
SNX2-201ENST00000379516 OR6Q1Q8NGQ2 317 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 ZNF524Q96C55 264 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 DTNBP1Q96EV8 351 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 SEMA4CQ9C0C4 833 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 FRYLO94915 3013 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 A0A1W2PQD3 144 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 CLDN25C9JDP6 229 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 MCIDASD6RGH6 385 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 MEN1O00255 615 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 ONECUT2O95948 504 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 IFNGP01579 166 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 IGHA1P01876 353 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 FGF5P12034 268 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 RPL4P36578 427 aaKnown RBP13.75□□□□□ -0.21
SNX2-201ENST00000379516 NRG3P56975 720 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 IL11RAQ14626 422 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 ZNF846Q147U1 533 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 GXYLT1Q4G148 440 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 PAPD4Q6PIY7 484 aaKnown RBP13.75□□□□□ -0.21
SNX2-201ENST00000379516 KLHL36Q8N4N3 616 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 C10orf53Q8N6V4 93 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 THAP3Q8WTV1 239 aaPredicted RBP13.75□□□□□ -0.21
SNX2-201ENST00000379516 TEAD3Q99594 435 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 ARHGAP9Q9BRR9 750 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 CRB3Q9BUF7 120 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 AKIRIN1Q9H9L7 192 aaPredicted RBP13.75□□□□□ -0.21
SNX2-201ENST00000379516 HMG20AQ9NP66 347 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 ERVK13-1Q9NX77 482 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 STUB1Q9UNE7 303 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 IER3IP1Q9Y5U9 82 aa13.75□□□□□ -0.21
SNX2-201ENST00000379516 COL5A1P20908 1838 aaPredicted RBP13.74□□□□□ -0.21
SNX2-201ENST00000379516 METTL15A6NJ78 407 aa13.74□□□□□ -0.21
SNX2-201ENST00000379516 SLC22A31A6NKX4 558 aa13.74□□□□□ -0.21
SNX2-201ENST00000379516 SCO2O43819 266 aa13.74□□□□□ -0.21
SNX2-201ENST00000379516 NUDT14O95848 222 aa13.74□□□□□ -0.21
SNX2-201ENST00000379516 CLUP10909 449 aa13.74□□□□□ -0.21
SNX2-201ENST00000379516 TACR3P29371 465 aa13.74□□□□□ -0.21
SNX2-201ENST00000379516 EVI2BP34910 448 aa13.74□□□□□ -0.21
SNX2-201ENST00000379516 GRK6P43250 576 aa13.74□□□□□ -0.21
SNX2-201ENST00000379516 GDPGP1Q6ZNW5 385 aa13.74□□□□□ -0.21
SNX2-201ENST00000379516 BPHLQ86WA6 291 aaPredicted RBP13.74□□□□□ -0.21
SNX2-201ENST00000379516 FAM98AQ8NCA5 519 aaKnown RBP13.74□□□□□ -0.21
SNX2-201ENST00000379516 AGBL5Q8NDL9 886 aa13.74□□□□□ -0.21
SNX2-201ENST00000379516 OR52E2Q8NGJ4 325 aa13.74□□□□□ -0.21
SNX2-201ENST00000379516 TP53INP1Q96A56 240 aa13.74□□□□□ -0.21
SNX2-201ENST00000379516 SPSB2Q99619 263 aa13.74□□□□□ -0.21
SNX2-201ENST00000379516 TMEM43Q9BTV4 400 aa13.74□□□□□ -0.21
SNX2-201ENST00000379516 ISYNA1Q9NPH2 558 aa13.74□□□□□ -0.21
SNX2-201ENST00000379516 AKIP1Q9NQ31 210 aa13.74□□□□□ -0.21
SNX2-201ENST00000379516 FBXO8Q9NRD0 319 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms