RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 IGHG3P01860 377 aa19.23■□□□□ 0.67
CBWD3-202ENST00000377342 APOBEC1P41238 236 aaKnown RBP19.23■□□□□ 0.67
CBWD3-202ENST00000377342 ALDH6A1Q02252 535 aaKnown RBP19.23■□□□□ 0.67
CBWD3-202ENST00000377342 FGD3Q5JSP0 725 aa19.23■□□□□ 0.67
CBWD3-202ENST00000377342 ZNF324BQ6AW86 544 aaPredicted RBP19.23■□□□□ 0.67
CBWD3-202ENST00000377342 TMEM179BQ7Z7N9 219 aa19.23■□□□□ 0.67
CBWD3-202ENST00000377342 PQLC1Q8N2U9 271 aa19.23■□□□□ 0.67
CBWD3-202ENST00000377342 RNF217Q8TC41 542 aa19.23■□□□□ 0.67
CBWD3-202ENST00000377342 MPP4Q96JB8 637 aa19.23■□□□□ 0.67
CBWD3-202ENST00000377342 SFXN2Q96NB2 322 aa19.23■□□□□ 0.67
CBWD3-202ENST00000377342 PIGQQ9BRB3 760 aa19.23■□□□□ 0.67
CBWD3-202ENST00000377342 REEP1Q9H902 201 aa19.23■□□□□ 0.67
CBWD3-202ENST00000377342 CHRNA9Q9UGM1 479 aa19.23■□□□□ 0.67
CBWD3-202ENST00000377342 SAMHD1Q9Y3Z3 626 aaKnown RBP19.23■□□□□ 0.67
CBWD3-202ENST00000377342 ELOA3DA6NLF2 546 aaPredicted RBP19.22■□□□□ 0.67
CBWD3-202ENST00000377342 SUSD5O60279 629 aa19.22■□□□□ 0.67
CBWD3-202ENST00000377342 PNMTP11086 282 aa19.22■□□□□ 0.67
CBWD3-202ENST00000377342 CCNA2P20248 432 aa19.22■□□□□ 0.67
CBWD3-202ENST00000377342 SHC1P29353 583 aa19.22■□□□□ 0.67
CBWD3-202ENST00000377342 HMGA2P52926 109 aa19.22■□□□□ 0.67
CBWD3-202ENST00000377342 EGR4Q05215 589 aa19.22■□□□□ 0.67
CBWD3-202ENST00000377342 SELENBP1Q13228 472 aa19.22■□□□□ 0.67
CBWD3-202ENST00000377342 SLC10A1Q14973 349 aa19.22■□□□□ 0.67
CBWD3-202ENST00000377342 EXOC3L2Q2M3D2 409 aa19.22■□□□□ 0.67
CBWD3-202ENST00000377342 ELOA3BQ3SY89 546 aa19.22■□□□□ 0.67
CBWD3-202ENST00000377342 DCST1Q5T197 706 aa19.22■□□□□ 0.67
CBWD3-202ENST00000377342 FAM180AQ6UWF9 173 aa19.22■□□□□ 0.67
CBWD3-202ENST00000377342 ELOA3Q8NG57 546 aa19.22■□□□□ 0.67
CBWD3-202ENST00000377342 SEMA6AQ9H2E6 1030 aa19.22■□□□□ 0.67
CBWD3-202ENST00000377342 TMEM185BQ9H7F4 350 aa19.22■□□□□ 0.67
CBWD3-202ENST00000377342 PLSCR2Q9NRY7 297 aa19.22■□□□□ 0.67
CBWD3-202ENST00000377342 ZNF337Q9Y3M9 751 aa19.22■□□□□ 0.67
CBWD3-202ENST00000377342 ZC3H12DA2A288 527 aaKnown RBP19.21■□□□□ 0.67
CBWD3-202ENST00000377342 PEPDP12955 493 aa19.21■□□□□ 0.67
CBWD3-202ENST00000377342 IFNA8P32881 189 aa19.21■□□□□ 0.67
CBWD3-202ENST00000377342 UGT2B15P54855 530 aa19.21■□□□□ 0.67
CBWD3-202ENST00000377342 LAPTM4AQ15012 233 aa19.21■□□□□ 0.67
CBWD3-202ENST00000377342 C3orf33Q6P1S2 294 aa19.21■□□□□ 0.67
CBWD3-202ENST00000377342 PODNL1Q6PEZ8 512 aa19.21■□□□□ 0.67
CBWD3-202ENST00000377342 P3H2Q8IVL5 708 aa19.21■□□□□ 0.67
CBWD3-202ENST00000377342 CISD2Q8N5K1 135 aaKnown RBP19.21■□□□□ 0.67
CBWD3-202ENST00000377342 NEIL3Q8TAT5 605 aa19.21■□□□□ 0.67
CBWD3-202ENST00000377342 EPYCQ99645 322 aa19.21■□□□□ 0.67
CBWD3-202ENST00000377342 BARD1Q99728 777 aaKnown RBP19.21■□□□□ 0.67
CBWD3-202ENST00000377342 OR11A1Q9GZK7 315 aa19.21■□□□□ 0.67
CBWD3-202ENST00000377342 SELENONQ9NZV5 590 aa19.21■□□□□ 0.67
CBWD3-202ENST00000377342 SPRR3Q9UBC9 169 aa19.21■□□□□ 0.67
CBWD3-202ENST00000377342 SHANK1Q9Y566 2161 aa19.21■□□□□ 0.66
CBWD3-202ENST00000377342 A0A087WUU8 490 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 NPIPA5E9PKD4 350 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 H3BML4 177 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 TNFRSF11BO00300 401 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 PIP5K1CO60331 668 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 NPIPB7O75200 414 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 CRYABP02511 175 aaKnown RBP19.2■□□□□ 0.66
CBWD3-202ENST00000377342 ANPEPP15144 967 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 CXCR1P25024 350 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 TBPL2Q6SJ96 375 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 ACOT11Q8WXI4 607 aaPredicted RBP19.2■□□□□ 0.66
CBWD3-202ENST00000377342 RELTQ969Z4 430 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 SNRNP40Q96DI7 357 aaKnown RBP19.2■□□□□ 0.66
CBWD3-202ENST00000377342 ALPK1Q96QP1 1244 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 MEPEQ9NQ76 525 aaPredicted RBP19.2■□□□□ 0.66
CBWD3-202ENST00000377342 NPIPA1Q9UND3 350 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 CFAP46Q8IYW2 2715 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 TRGV5A0A0B4J1U4 118 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 SH3PXD2BA1X283 911 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 GNGT2O14610 69 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 ATXN7O15265 892 aaPredicted RBP19.2■□□□□ 0.66
CBWD3-202ENST00000377342 CHMP24386 653 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 RBM34P42696 430 aaKnown RBP19.2■□□□□ 0.66
CBWD3-202ENST00000377342 SMIM11AP58511 58 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 C19orf57Q0VDD7 668 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 TMEM239Q8WW34 195 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 CENPNQ96H22 339 aaPredicted RBP19.2■□□□□ 0.66
CBWD3-202ENST00000377342 TMEM43Q9BTV4 400 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 DCLRE1BQ9H816 532 aa19.2■□□□□ 0.66
CBWD3-202ENST00000377342 NKX1-2Q9UD57 310 aaPredicted RBP19.2■□□□□ 0.66
CBWD3-202ENST00000377342 COL6A6A6NMZ7 2263 aa19.19■□□□□ 0.66
CBWD3-202ENST00000377342 ZNF208O43345 1280 aa19.19■□□□□ 0.66
CBWD3-202ENST00000377342 TDGF1P3P51864 188 aa19.19■□□□□ 0.66
CBWD3-202ENST00000377342 HSF1Q00613 529 aa19.19■□□□□ 0.66
CBWD3-202ENST00000377342 RIPK1Q13546 671 aa19.19■□□□□ 0.66
CBWD3-202ENST00000377342 SYT14P1Q58G82 188 aa19.19■□□□□ 0.66
CBWD3-202ENST00000377342 NHSL2Q5HYW2 709 aa19.19■□□□□ 0.66
CBWD3-202ENST00000377342 C1QL3Q5VWW1 255 aa19.19■□□□□ 0.66
CBWD3-202ENST00000377342 GGNQ86UU5 652 aa19.19■□□□□ 0.66
CBWD3-202ENST00000377342 EPHX4Q8IUS5 362 aa19.19■□□□□ 0.66
CBWD3-202ENST00000377342 HS3ST5Q8IZT8 346 aa19.19■□□□□ 0.66
CBWD3-202ENST00000377342 PFN4Q8NHR9 129 aa19.19■□□□□ 0.66
CBWD3-202ENST00000377342 STX18Q9P2W9 335 aaKnown RBP19.19■□□□□ 0.66
CBWD3-202ENST00000377342 MAGED1Q9Y5V3 778 aaPredicted RBP19.19■□□□□ 0.66
CBWD3-202ENST00000377342 SMG1Q96Q15 3661 aaKnown RBP19.19■□□□□ 0.66
CBWD3-202ENST00000377342 A0A1B0GVC2 190 aa19.18■□□□□ 0.66
CBWD3-202ENST00000377342 KPNA4O00629 521 aaPredicted RBP19.18■□□□□ 0.66
CBWD3-202ENST00000377342 HCN1O60741 890 aa19.18■□□□□ 0.66
CBWD3-202ENST00000377342 BAG2O95816 211 aa19.18■□□□□ 0.66
CBWD3-202ENST00000377342 OPN1LWP04000 364 aa19.18■□□□□ 0.66
CBWD3-202ENST00000377342 BMP7P18075 431 aa19.18■□□□□ 0.66
CBWD3-202ENST00000377342 FPR1P21462 350 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms