RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 CREB3L2Q70SY1 520 aa23.31■■□□□ 1.32
C9orf40-201ENST00000376854 CA13Q8N1Q1 262 aa23.31■■□□□ 1.32
C9orf40-201ENST00000376854 ARL14Q8N4G2 192 aa23.31■■□□□ 1.32
C9orf40-201ENST00000376854 OR7G1Q8NGA0 311 aa23.31■■□□□ 1.32
C9orf40-201ENST00000376854 OR52E2Q8NGJ4 325 aa23.31■■□□□ 1.32
C9orf40-201ENST00000376854 RSC1A1Q92681 617 aa23.31■■□□□ 1.32
C9orf40-201ENST00000376854 PHF21AQ96BD5 680 aa23.31■■□□□ 1.32
C9orf40-201ENST00000376854 ZMYND19Q96E35 227 aaPredicted RBP23.31■■□□□ 1.32
C9orf40-201ENST00000376854 ERMAPQ96PL5 475 aaPredicted RBP23.31■■□□□ 1.32
C9orf40-201ENST00000376854 KLF8O95600 359 aaPredicted RBP23.31■■□□□ 1.32
C9orf40-201ENST00000376854 APBB3O95704 486 aa23.31■■□□□ 1.32
C9orf40-201ENST00000376854 EGFP01133 1207 aa23.31■■□□□ 1.32
C9orf40-201ENST00000376854 CRYZQ08257 329 aaKnown RBP23.31■■□□□ 1.32
C9orf40-201ENST00000376854 ALG10BQ5I7T1 473 aa23.31■■□□□ 1.32
C9orf40-201ENST00000376854 ZNF655Q8N720 491 aaPredicted RBP23.31■■□□□ 1.32
C9orf40-201ENST00000376854 HSD17B8Q92506 261 aa23.31■■□□□ 1.32
C9orf40-201ENST00000376854 ZNF426Q9BUY5 554 aa23.31■■□□□ 1.32
C9orf40-201ENST00000376854 DPAGT1Q9H3H5 408 aa23.31■■□□□ 1.32
C9orf40-201ENST00000376854 MAGEB4O15481 346 aaPredicted RBP23.3■■□□□ 1.32
C9orf40-201ENST00000376854 GALR3O60755 368 aaPredicted RBP23.3■■□□□ 1.32
C9orf40-201ENST00000376854 CBX7O95931 251 aa23.3■■□□□ 1.32
C9orf40-201ENST00000376854 SERPINA3P01011 423 aa23.3■■□□□ 1.32
C9orf40-201ENST00000376854 RBM34P42696 430 aaKnown RBP23.3■■□□□ 1.32
C9orf40-201ENST00000376854 ACAA2P42765 397 aaKnown RBP23.3■■□□□ 1.32
C9orf40-201ENST00000376854 LYPD4Q6UWN0 246 aa23.3■■□□□ 1.32
C9orf40-201ENST00000376854 DGAT2L6Q6ZPD8 337 aa23.3■■□□□ 1.32
C9orf40-201ENST00000376854 FAM98AQ8NCA5 519 aaKnown RBP23.3■■□□□ 1.32
C9orf40-201ENST00000376854 SDR9C7Q8NEX9 313 aa23.3■■□□□ 1.32
C9orf40-201ENST00000376854 BAHD1Q8TBE0 780 aaPredicted RBP23.3■■□□□ 1.32
C9orf40-201ENST00000376854 THAP4Q8WY91 577 aa23.3■■□□□ 1.32
C9orf40-201ENST00000376854 ANKRD9Q96BM1 317 aaPredicted RBP23.3■■□□□ 1.32
C9orf40-201ENST00000376854 SIPA1Q96FS4 1042 aa23.3■■□□□ 1.32
C9orf40-201ENST00000376854 TICRRQ7Z2Z1 1910 aa23.3■■□□□ 1.32
C9orf40-201ENST00000376854 TRAV1-2A0A0B4J238 106 aa23.3■■□□□ 1.32
C9orf40-201ENST00000376854 NOTOA8MTQ0 251 aa23.3■■□□□ 1.32
C9orf40-201ENST00000376854 FABP7O15540 132 aa23.3■■□□□ 1.32
C9orf40-201ENST00000376854 HYAL3O43820 417 aaPredicted RBP23.3■■□□□ 1.32
C9orf40-201ENST00000376854 CD3GP09693 182 aa23.3■■□□□ 1.32
C9orf40-201ENST00000376854 SNRPBP14678 240 aaKnown RBP23.3■■□□□ 1.32
C9orf40-201ENST00000376854 TFF2Q03403 129 aa23.3■■□□□ 1.32
C9orf40-201ENST00000376854 CCDC58Q4VC31 144 aa23.3■■□□□ 1.32
C9orf40-201ENST00000376854 RNASE12Q5GAN4 147 aaKnown RBP23.3■■□□□ 1.32
C9orf40-201ENST00000376854 SYT9Q86SS6 491 aa23.3■■□□□ 1.32
C9orf40-201ENST00000376854 TOMM5Q8N4H5 51 aa23.3■■□□□ 1.32
C9orf40-201ENST00000376854 OR4K13Q8NH42 304 aa23.3■■□□□ 1.32
C9orf40-201ENST00000376854 IRF2BPLQ9H1B7 796 aa23.3■■□□□ 1.32
C9orf40-201ENST00000376854 DNAJB12Q9NXW2 375 aaKnown RBP23.3■■□□□ 1.32
C9orf40-201ENST00000376854 A0A0B4J203 849 aa23.29■■□□□ 1.32
C9orf40-201ENST00000376854 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.29■■□□□ 1.32
C9orf40-201ENST00000376854 TFP02787 698 aa23.29■■□□□ 1.32
C9orf40-201ENST00000376854 ATF1P18846 271 aa23.29■■□□□ 1.32
C9orf40-201ENST00000376854 LYPD8Q6UX82 237 aa23.29■■□□□ 1.32
C9orf40-201ENST00000376854 GHDCQ8N2G8 530 aa23.29■■□□□ 1.32
C9orf40-201ENST00000376854 LRRC17Q8N6Y2 441 aa23.29■■□□□ 1.32
C9orf40-201ENST00000376854 PATE1Q8WXA2 126 aa23.29■■□□□ 1.32
C9orf40-201ENST00000376854 SCMH1Q96GD3 660 aa23.29■■□□□ 1.32
C9orf40-201ENST00000376854 TRIM2Q9C040 744 aa23.29■■□□□ 1.32
C9orf40-201ENST00000376854 EVA1AQ9H8M9 152 aa23.29■■□□□ 1.32
C9orf40-201ENST00000376854 STARD5Q9NSY2 213 aa23.29■■□□□ 1.32
C9orf40-201ENST00000376854 SERTAD3Q9UJW9 196 aa23.29■■□□□ 1.32
C9orf40-201ENST00000376854 C7orf66A4D0T2 115 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 C2orf74A8MZ97 194 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 UBL3O95164 117 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 HIST1H1CP16403 213 aaKnown RBP23.28■■□□□ 1.32
C9orf40-201ENST00000376854 GDI2P50395 445 aaKnown RBP23.28■■□□□ 1.32
C9orf40-201ENST00000376854 SRP54P61011 504 aaKnown RBP23.28■■□□□ 1.32
C9orf40-201ENST00000376854 CSNK1A1LQ8N752 337 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 OR4D9Q8NGE8 314 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 OR51L1Q8NGJ5 315 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 YIPF5Q969M3 257 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 SMIM19Q96E16 107 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 PELI1Q96FA3 418 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 ZFP3Q96NJ6 502 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 CDCA3Q99618 268 aaPredicted RBP23.28■■□□□ 1.32
C9orf40-201ENST00000376854 GHITMQ9H3K2 345 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 MRPS7Q9Y2R9 242 aaKnown RBP23.28■■□□□ 1.32
C9orf40-201ENST00000376854 NUBP2Q9Y5Y2 271 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 OGG1O15527 345 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 OR10H2O60403 315 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 EPXP11678 715 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 STOMP27105 288 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 GBX2P52951 348 aaPredicted RBP23.28■■□□□ 1.32
C9orf40-201ENST00000376854 ZNF767PQ75MW2 155 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 GRAMD2AQ8IUY3 354 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 SLC43A2Q8N370 569 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 BRD7Q9NPI1 651 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 CHRNA9Q9UGM1 479 aa23.28■■□□□ 1.32
C9orf40-201ENST00000376854 FLRT2O43155 660 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 TCRBP04435 133 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 IFI6P09912 130 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 ACTA2P62736 377 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 ACTG2P63267 376 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 DGCR2P98153 550 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 PITPNAQ00169 270 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 PSG6Q00889 435 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 GAS6Q14393 721 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 CDK5R1Q15078 307 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 RNF44Q7L0R7 432 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 SIAH3Q8IW03 269 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 C9orf62Q8N4C0 152 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms