RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 SLC28A1O00337 649 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 CYTIPO60759 359 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 RAD51DO75771 328 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 ITGA2P17301 1181 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 EPHA3P29320 983 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 PRIM2P49643 509 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 ARFIP2P53365 341 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 SCGB2A2Q13296 93 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 SPDYAQ5MJ70 313 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 C1QTNF12Q5T7M4 302 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 OR7E24Q6IFN5 339 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 IKBIPQ70UQ0 350 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 SZRD1Q7Z422 152 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 UBE2J2Q8N2K1 259 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 ZNF433Q8N7K0 673 aaPredicted RBP13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 OR52N5Q8NH56 324 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 FBXO27Q8NI29 283 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 BCAS4Q8TDM0 211 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 HOXB13Q92826 284 aaPredicted RBP13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 MRGPRX4Q96LA9 322 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 MS4A4EQ96PG1 132 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 AKTIPQ9H8T0 292 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 NTMQ9P121 344 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 IGHV3-15A0A0B4J1V0 119 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 KCNK2O95069 426 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 ZNF23P17027 643 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 P2RX1P51575 399 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 SNRPD2P62316 118 aaKnown RBP13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 PHC1P78364 1004 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 CHRNEQ04844 493 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 SPOCK1Q08629 439 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 HSPB3Q12988 150 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 CARTPTQ16568 116 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 IMPG1Q17R60 797 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 LSM12Q3MHD2 195 aaKnown RBP13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 FBXW9Q5XUX1 488 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 FAM71E1Q6IPT2 247 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 C3orf33Q6P1S2 294 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 ZCCHC12Q6PEW1 402 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 UGT2A3Q6UWM9 527 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 B3GLCTQ6Y288 498 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 HOMEZQ8IX15 550 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 COX18Q8N8Q8 333 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 ATP6V1C2Q8NEY4 427 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 PHOSPHO1Q8TCT1 267 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 SIKE1Q9BRV8 207 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 TAS2R16Q9NYV7 291 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 SLC25A15Q9Y619 301 aa13.04□□□□□ -0.32
CDKN1A-202ENST00000373711 LSM1O15116 133 aaKnown RBP13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 SMAD9O15198 467 aaKnown RBP13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 PDPK1O15530 556 aa13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 PEX11AO75192 247 aa13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 ALOX5P09917 674 aa13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 ATP6V1C1P21283 382 aa13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 PRPH2P23942 346 aa13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 MAP3K8P41279 467 aa13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 PRKAG1P54619 331 aa13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 ZNF117Q03924 483 aa13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 KIAA0040Q15053 153 aa13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 NUP43Q8NFH3 380 aa13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 APH1AQ96BI3 265 aa13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 TUBGCP3Q96CW5 907 aa13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 ZNF300Q96RE9 604 aaPredicted RBP13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 CCT7Q99832 543 aa13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 CCDC28BQ9BUN5 200 aa13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 HOXD1Q9GZZ0 328 aa13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 ASB6Q9NWX5 421 aa13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 TMEFF2Q9UIK5 374 aaPredicted RBP13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 FBXO9Q9UK97 447 aaPredicted RBP13.03□□□□□ -0.32
CDKN1A-202ENST00000373711 IGHV4-61A0A0C4DH41 118 aa13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 NPIPB8E9PQR5 432 aa13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 NDUFAB1O14561 156 aa13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 ACTG1P63261 375 aa13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 CSNK2A1P68400 391 aaPredicted RBP13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 POU6F2P78424 691 aaPredicted RBP13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 CD226Q15762 336 aa13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 GALNTL6Q49A17 601 aa13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 RFTN2Q52LD8 501 aaPredicted RBP13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 C6orf136Q5SQH8 315 aa13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 NXNQ6DKJ4 435 aa13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 C17orf78Q8N4C9 275 aa13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 C3orf56Q8N813 242 aa13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 TOR1AIP2Q8NFQ8 470 aa13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 STON2Q8WXE9 905 aa13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 ZHX1-C8orf76Q96EF9 292 aa13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 C1orf159Q96HA4 380 aa13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 BHLHE41Q9C0J9 482 aaPredicted RBP13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 TCF7L2Q9NQB0 619 aa13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 METRNQ9UJH8 293 aa13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 ING1Q9UK53 422 aaPredicted RBP13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 AMDHD2Q9Y303 409 aa13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 NOSIPQ9Y314 301 aaKnown RBP13.02□□□□□ -0.33
CDKN1A-202ENST00000373711 A0A1W2PNR3 127 aa13.01□□□□□ -0.33
CDKN1A-202ENST00000373711 GTPBP1O00178 669 aaKnown RBP13.01□□□□□ -0.33
CDKN1A-202ENST00000373711 GPR171O14626 319 aa13.01□□□□□ -0.33
CDKN1A-202ENST00000373711 SEC22BO75396 215 aa13.01□□□□□ -0.33
CDKN1A-202ENST00000373711 RSL1D1O76021 490 aaKnown RBP13.01□□□□□ -0.33
CDKN1A-202ENST00000373711 LY6HO94772 140 aa13.01□□□□□ -0.33
CDKN1A-202ENST00000373711 ALDOCP09972 364 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms