RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 CRMP1Q14194 572 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 INAQ16352 499 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 ATG4DQ86TL0 474 aaPredicted RBP17.92■□□□□ 0.46
HDAC1-201ENST00000373548 B3GNT3Q9Y2A9 372 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 ZDBF2Q9HCK1 2354 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 CCDC182A6NF36 153 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 PPM1BO75688 479 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 NDUFB2O95178 105 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 HK1P19367 917 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 PLCXD2Q0VAA5 305 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 KLHL12Q53G59 568 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 IFI44Q8TCB0 444 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 OMA1Q96E52 524 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 CCNL2Q96S94 520 aaPredicted RBP17.92■□□□□ 0.46
HDAC1-201ENST00000373548 MESP1Q9BRJ9 268 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 ASPNQ9BXN1 380 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 SLC19A3Q9BZV2 496 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 PNMA8CA0A1B0GUJ8 204 aa17.91■□□□□ 0.46
HDAC1-201ENST00000373548 ELOA3DA6NLF2 546 aaPredicted RBP17.91■□□□□ 0.46
HDAC1-201ENST00000373548 OR7A10O76100 309 aa17.91■□□□□ 0.46
HDAC1-201ENST00000373548 LALBAP00709 142 aa17.91■□□□□ 0.46
HDAC1-201ENST00000373548 ZNF791Q3KP31 576 aaPredicted RBP17.91■□□□□ 0.46
HDAC1-201ENST00000373548 ELOA3BQ3SY89 546 aa17.91■□□□□ 0.46
HDAC1-201ENST00000373548 ARHGAP11AQ6P4F7 1023 aa17.91■□□□□ 0.46
HDAC1-201ENST00000373548 CYB561A3Q8NBI2 242 aa17.91■□□□□ 0.46
HDAC1-201ENST00000373548 ELOA3Q8NG57 546 aa17.91■□□□□ 0.46
HDAC1-201ENST00000373548 OR5M3Q8NGP4 307 aa17.91■□□□□ 0.46
HDAC1-201ENST00000373548 C6orf62Q9GZU0 229 aaPredicted RBP17.91■□□□□ 0.46
HDAC1-201ENST00000373548 LAT2Q9GZY6 243 aa17.91■□□□□ 0.46
HDAC1-201ENST00000373548 CHRNA9Q9UGM1 479 aa17.91■□□□□ 0.46
HDAC1-201ENST00000373548 SSR3Q9UNL2 185 aa17.91■□□□□ 0.46
HDAC1-201ENST00000373548 SF3B6Q9Y3B4 125 aaKnown RBP17.91■□□□□ 0.46
HDAC1-201ENST00000373548 IDSB3KWA1 339 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 MCIDASD6RGH6 385 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 PNMTP11086 282 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 ZNF3P17036 446 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 PAICSP22234 425 aaKnown RBP17.9■□□□□ 0.46
HDAC1-201ENST00000373548 SLC2A5P22732 501 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 ABCD3P28288 659 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 ZNF117Q03924 483 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 KLHL36Q8N4N3 616 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 TMEM203Q969S6 136 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 ERMAPQ96PL5 475 aaPredicted RBP17.9■□□□□ 0.46
HDAC1-201ENST00000373548 OR51V1Q9H2C8 321 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 YARS2Q9Y2Z4 477 aaKnown RBP17.9■□□□□ 0.46
HDAC1-201ENST00000373548 ZNF670-ZNF695F2Z2N8 137 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 LRRTM2O43300 516 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 CLUP10909 449 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 RPS25P62851 125 aaKnown RBP17.9■□□□□ 0.46
HDAC1-201ENST00000373548 ARMC4Q5T2S8 1044 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 ZNF385CQ66K41 422 aaPredicted RBP17.9■□□□□ 0.46
HDAC1-201ENST00000373548 ANKRD37Q7Z713 158 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 MARCH3Q86UD3 253 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 TMEM99Q8N816 258 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 C17orf47Q8NEP4 570 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 OR52N1Q8NH53 320 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 UFD1Q92890 307 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 NECAB3Q96P71 396 aaPredicted RBP17.9■□□□□ 0.46
HDAC1-201ENST00000373548 TEAD3Q99594 435 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 APMAPQ9HDC9 416 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 FBXL4Q9UKA2 621 aa17.9■□□□□ 0.46
HDAC1-201ENST00000373548 SLC22A31A6NKX4 558 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 C17orf51A8MQB3 221 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 C12orf71A8MTZ7 269 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 HEXBP07686 556 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 HOXD12P35452 270 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 RPS19P39019 145 aaKnown RBP17.89■□□□□ 0.45
HDAC1-201ENST00000373548 DCDP81605 110 aaKnown RBP17.89■□□□□ 0.45
HDAC1-201ENST00000373548 TMED1Q13445 227 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 GXYLT1Q4G148 440 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 TRIM61Q5EBN2 209 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 ZFP41Q8N8Y5 198 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 SPRYD4Q8WW59 207 aaPredicted RBP17.89■□□□□ 0.45
HDAC1-201ENST00000373548 TMEM43Q9BTV4 400 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 TXNL4BQ9NX01 149 aaKnown RBP17.89■□□□□ 0.45
HDAC1-201ENST00000373548 ZNF337Q9Y3M9 751 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 hCG_2014768A0A024R1R8 64 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 A0A1W2PQD3 144 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 ALG1L2C9J202 215 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 PLD2O14939 933 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 HCRTR2O43614 444 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 IFNGP01579 166 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 SOX6P35712 828 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 PNLIPRP2P54317 469 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 RPS7P62081 194 aaKnown RBP17.89■□□□□ 0.45
HDAC1-201ENST00000373548 RPS4XP62701 263 aaKnown RBP17.89■□□□□ 0.45
HDAC1-201ENST00000373548 DAB2P98082 770 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 PHF19Q5T6S3 580 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 ZNF322Q6U7Q0 402 aaPredicted RBP17.89■□□□□ 0.45
HDAC1-201ENST00000373548 Q6ZNX1 250 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 PRR23CQ6ZRP0 262 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 ACBD7Q8N6N7 88 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 NFAM1Q8NET5 270 aaPredicted RBP17.89■□□□□ 0.45
HDAC1-201ENST00000373548 OCIAD1Q9NX40 245 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 TOR4AQ9NXH8 423 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 IER3IP1Q9Y5U9 82 aa17.89■□□□□ 0.45
HDAC1-201ENST00000373548 PCNX3Q9H6A9 2034 aa17.88■□□□□ 0.45
HDAC1-201ENST00000373548 CER1O95813 267 aa17.88■□□□□ 0.45
HDAC1-201ENST00000373548 HIST1H1CP16403 213 aaKnown RBP17.88■□□□□ 0.45
HDAC1-201ENST00000373548 SLC16A1P53985 500 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms