RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ZNF701Q9NV72 531 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 DOCK2Q92608 1830 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 ZNF16P17020 682 aaPredicted RBP12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 IDUAP35475 653 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 GGT2P36268 569 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 MC3RP41968 323 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 SELENOWP63302 87 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 MBTPS1Q14703 1052 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 FAM58AQ8N1B3 248 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 RELL2Q8NC24 303 aaPredicted RBP12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 FAM46AQ96IP4 442 aaKnown RBP12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 MACROD1Q9BQ69 325 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 INPP5KQ9BT40 448 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 NSG1A0A0A6YYJ2 146 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 TRAPPC13A5PLN9 417 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 GPRIN2O60269 458 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 F10P00742 488 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 CD3GP09693 182 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 CXCR4P61073 352 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 CEBPEQ15744 281 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 RSPO2Q6UXX9 243 aaPredicted RBP12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 PXKQ7Z7A4 578 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 C19orf47Q8N9M1 422 aaKnown RBP12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 OR4K5Q8NGD3 323 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 ASB11Q8WXH4 323 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 DCBLD2Q96PD2 775 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 EEF1E1-BLOC1S5C9J1V9 151 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 F5H5P2 479 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 GPR39O43194 453 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 SRFP11831 508 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 PSMB5P28074 263 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 CHATP28329 748 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 PCGF2P35227 344 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 HNRNPA3P51991 378 aaKnown RBP12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 EEF1A1P68104 462 aaKnown RBP12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 HSF1Q00613 529 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 SLC17A1Q14916 467 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 ZNF791Q3KP31 576 aaPredicted RBP12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 RNASE10Q5GAN6 216 aaKnown RBP12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 MANEAQ5SRI9 462 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 EEF1A1P5Q5VTE0 462 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 PRR22Q8IZ63 422 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 ZNF480Q8WV37 535 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 TMEM68Q96MH6 324 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 GORASP2Q9H8Y8 452 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 TEX10Q9NXF1 929 aaPredicted RBP12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 FAM96BQ9Y3D0 163 aa12.46□□□□□ -0.41
RAPGEF1-201ENST00000372189 CPNE6O95741 557 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 CDK1P06493 297 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 RD3LP0DJH9 198 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 UGT2B7P16662 529 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 LSSP48449 732 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 VEZF1Q14119 521 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 ARSJQ5FYB0 599 aaPredicted RBP12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 ALG10BQ5I7T1 473 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 CPZQ66K79 652 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 GAB3Q8WWW8 586 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 BORCS7Q96B45 105 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 ANAPC16Q96DE5 110 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 SFXN2Q96NB2 322 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 MMP17Q9ULZ9 603 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 PAPPAQ13219 1627 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 TRBV11-1A0A0K0K1C0 115 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 SLC22A20A6NK97 555 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 SRPX2O60687 465 aaPredicted RBP12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 LDB3O75112 727 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 LGI1O95970 557 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 MMP12P39900 470 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 RIDAP52758 137 aaKnown RBP12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 RAB31Q13636 194 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 C6orf132Q5T0Z8 1188 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 PLBD1Q6P4A8 553 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 ZNF619Q8N2I2 560 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 MFSD9Q8NBP5 474 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 ANKK1Q8NFD2 765 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 NLGN4YQ8NFZ3 816 aaPredicted RBP12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 CDC6Q99741 560 aa12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 SORBS1Q9BX66 1292 aaKnown RBP12.46□□□□□ -0.42
RAPGEF1-201ENST00000372189 RPP30P78346 268 aaKnown RBP12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 MALLQ13021 153 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 LIX1LQ8IVB5 337 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 ZNF566Q969W8 418 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 SMIM12Q96EX1 92 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR51E2Q9H255 320 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 MEIOCA2RUB1 952 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 BTBD17A6NE02 478 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 HTR3BO95264 441 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 MAS1P04201 325 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 SLC6A8P48029 635 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 RANP62826 216 aaKnown RBP12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 TRA2BP62995 288 aaKnown RBP12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 TLE3Q04726 772 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 ZNF691Q5VV52 312 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 AGAP6Q5VW22 663 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 MAL2Q969L2 176 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 ELMOD3Q96FG2 381 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 AGAP4Q96P64 663 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 BTNL2Q9UIR0 455 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 STAG3L2P0CL84 134 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 AKR1C4P17516 323 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms