RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 GKN3PP0CG01 181 aa14.38□□□□□ -0.11
PFDN4-201ENST00000371419 GP1BBP13224 206 aa14.38□□□□□ -0.11
PFDN4-201ENST00000371419 ZNF708P17019 499 aa14.38□□□□□ -0.11
PFDN4-201ENST00000371419 IDH2P48735 452 aaKnown RBP14.38□□□□□ -0.11
PFDN4-201ENST00000371419 KCNC4Q03721 635 aa14.38□□□□□ -0.11
PFDN4-201ENST00000371419 BLMHQ13867 455 aa14.38□□□□□ -0.11
PFDN4-201ENST00000371419 C4orf17Q53FE4 359 aa14.38□□□□□ -0.11
PFDN4-201ENST00000371419 RASSF5Q8WWW0 418 aa14.38□□□□□ -0.11
PFDN4-201ENST00000371419 RELTQ969Z4 430 aa14.38□□□□□ -0.11
PFDN4-201ENST00000371419 TAMM41Q96BW9 452 aa14.38□□□□□ -0.11
PFDN4-201ENST00000371419 SEPHS2Q99611 448 aa14.38□□□□□ -0.11
PFDN4-201ENST00000371419 AHRRA9YTQ3 701 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 FRS3O43559 492 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 EPPINO95925 133 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 IFNA14P01570 189 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 HOXD4P09016 255 aaPredicted RBP14.37□□□□□ -0.11
PFDN4-201ENST00000371419 GABRA1P14867 456 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 ACVR2AP27037 513 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 ELK4P28324 431 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 KDELR2P33947 212 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 PTGER4P35408 488 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 ACAA2P42765 397 aaKnown RBP14.37□□□□□ -0.11
PFDN4-201ENST00000371419 KCNJ5P48544 419 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 CRYBA2P53672 197 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 DLX5P56178 289 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 CLDN18P56856 261 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 COPZ1P61923 177 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 RAC1P63000 192 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 SRYQ05066 204 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 DUSP7Q16829 419 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 GALNT4Q8N4A0 578 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 MEIOBQ8N635 442 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 EVA1AQ9H8M9 152 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 DCAF13Q9NV06 445 aaKnown RBP14.37□□□□□ -0.11
PFDN4-201ENST00000371419 SAMD4AQ9UPU9 718 aaKnown RBP14.37□□□□□ -0.11
PFDN4-201ENST00000371419 SLC5A6Q9Y289 635 aa14.37□□□□□ -0.11
PFDN4-201ENST00000371419 TENM4Q6N022 2769 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 E9PLN8 166 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 SYT5O00445 386 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 CCL21O00585 134 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 LGI1O95970 557 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 PRG2P13727 222 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 CD247P20963 164 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 MERTKQ12866 999 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 SF3B4Q15427 424 aaKnown RBP eCLIP14.36□□□□□ -0.11
PFDN4-201ENST00000371419 LRRC23Q53EV4 343 aaPredicted RBP14.36□□□□□ -0.11
PFDN4-201ENST00000371419 C3P1Q6ZMU1 363 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 PLEKHM3Q6ZWE6 761 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 GRINAQ7Z429 371 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 FJX1Q86VR8 437 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 COMTD1Q86VU5 262 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 MARVELD2Q8N4S9 558 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 GPR32P1Q8NGA4 272 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 SMPDL3BQ92485 455 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 CIB1Q99828 191 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 VKORC1Q9BQB6 163 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 SCOCQ9UIL1 159 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 MEMO1Q9Y316 297 aa14.36□□□□□ -0.11
PFDN4-201ENST00000371419 CLOCKO15516 846 aa14.35□□□□□ -0.11
PFDN4-201ENST00000371419 IL11P20809 199 aa14.35□□□□□ -0.11
PFDN4-201ENST00000371419 APOBEC1P41238 236 aaKnown RBP14.35□□□□□ -0.11
PFDN4-201ENST00000371419 SLC1A3P43003 542 aa14.35□□□□□ -0.11
PFDN4-201ENST00000371419 HTR3AP46098 478 aa14.35□□□□□ -0.11
PFDN4-201ENST00000371419 CLDN20P56880 219 aa14.35□□□□□ -0.11
PFDN4-201ENST00000371419 RGS8P57771 180 aaPredicted RBP14.35□□□□□ -0.11
PFDN4-201ENST00000371419 SELENBP1Q13228 472 aa14.35□□□□□ -0.11
PFDN4-201ENST00000371419 C1orf185Q5T7R7 199 aa14.35□□□□□ -0.11
PFDN4-201ENST00000371419 WBP2NLQ6ICG8 309 aa14.35□□□□□ -0.11
PFDN4-201ENST00000371419 UBQLNLQ8IYU4 475 aa14.35□□□□□ -0.11
PFDN4-201ENST00000371419 ZPLD1Q8TCW7 415 aa14.35□□□□□ -0.11
PFDN4-201ENST00000371419 SLC47A1Q96FL8 570 aa14.35□□□□□ -0.11
PFDN4-201ENST00000371419 TMEM185BQ9H7F4 350 aa14.35□□□□□ -0.11
PFDN4-201ENST00000371419 SERINC1Q9NRX5 453 aa14.35□□□□□ -0.11
PFDN4-201ENST00000371419 RPS6KA6Q9UK32 745 aa14.35□□□□□ -0.11
PFDN4-201ENST00000371419 BAG5Q9UL15 447 aa14.35□□□□□ -0.11
PFDN4-201ENST00000371419 GJE1A6NN92 205 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 SEC14L5O43304 696 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 EFNA2O43921 213 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 FESP07332 822 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 POLR2HP52434 150 aaKnown RBP14.34□□□□□ -0.11
PFDN4-201ENST00000371419 ZNF136P52737 540 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 SUCLG1P53597 346 aaKnown RBP14.34□□□□□ -0.11
PFDN4-201ENST00000371419 HOXC5Q00444 222 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 PDK3Q15120 406 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 ACSF3Q4G176 576 aaPredicted RBP14.34□□□□□ -0.11
PFDN4-201ENST00000371419 CYBRD1Q53TN4 286 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 RTL6Q6ICC9 239 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 MTFR2Q6P444 385 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 MYO7BQ6PIF6 2116 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 POMZP3Q6PJE2 187 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 B3GNT6Q6ZMB0 384 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 GGNQ86UU5 652 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 CADM2Q8N3J6 435 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 PROX1Q92786 737 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 PYURFQ96I23 114 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 ARHGDIGQ99819 225 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 TUBA1CQ9BQE3 449 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 CTPS2Q9NRF8 586 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 DNAJB9Q9UBS3 223 aa14.34□□□□□ -0.11
PFDN4-201ENST00000371419 TESQ9UGI8 421 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms