RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 FAM83HQ6ZRV2 1179 aaPredicted RBP20.69■□□□□ 0.9
TM9SF3-201ENST00000371142 BABAM2Q9NXR7 383 aa20.69■□□□□ 0.9
TM9SF3-201ENST00000371142 DNMT3BQ9UBC3 853 aaKnown RBP20.69■□□□□ 0.9
TM9SF3-201ENST00000371142 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 PRAF2O60831 178 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 ABOP16442 354 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 RPL23AP62750 156 aaKnown RBP20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 POU4F3Q15319 338 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 Q6ZPB1 254 aaPredicted RBP20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 TMEM185AQ8NFB2 350 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 GTF2H4Q92759 462 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 ACP2P11117 423 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 RPL35P42766 123 aaKnown RBP20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 BBS1Q8NFJ9 593 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 SLC6A20Q9NP91 592 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 EMC3Q9P0I2 261 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 EDN3P14138 238 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 KCNJ10P78508 379 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 MFSD9Q8NBP5 474 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 OR8J2Q8NGG1 315 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 PAQR8Q8TEZ7 354 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 QRSL1Q9H0R6 528 aaKnown RBP20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 USP22Q9UPT9 525 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 RRAS2P62070 204 aaPredicted RBP20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 FOXRED1Q96CU9 486 aaPredicted RBP20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 HHIPL1Q96JK4 782 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 VN1R3Q9BXE9 311 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 OLAHQ9NV23 265 aa20.68■□□□□ 0.9
TM9SF3-201ENST00000371142 H7C1C5 153 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 LCN6P62502 163 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 SMN1Q16637 294 aaKnown RBP20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 OR2G6Q5TZ20 316 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 ZNF585AQ6P3V2 769 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 RABEPKQ7Z6M1 372 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 DRAXINQ8NBI3 349 aaPredicted RBP20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 BEST4Q8NFU0 473 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 ZNF845Q96IR2 970 aaPredicted RBP20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 CNOT2Q9NZN8 540 aaKnown RBP20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 RPS18P62269 152 aaKnown RBP20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 LTC4SQ16873 150 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 FAM78AQ5JUQ0 283 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 NIPAL3Q6P499 406 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 OR5L1Q8NGL2 311 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 ULBP3Q9BZM4 244 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 USP3Q9Y6I4 520 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 ANKRD33BA6NCL7 494 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 TRAPPC2LH3BP13 241 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 TP53P04637 393 aaPredicted RBP20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 ADRA1AP35348 466 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 TGFBR3Q03167 851 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 MKXQ8IYA7 352 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 MMP21Q8N119 569 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 ZNF486Q96H40 463 aaPredicted RBP20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 C2orf72A6NCS6 295 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 HOXB5P09067 269 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 SORCS2Q96PQ0 1159 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 EHFQ9NZC4 300 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 SUSD5O60279 629 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 GCAP28676 217 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 ATP1B3P54709 279 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 HTD2P86397 168 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 FRMPD2BQ6IN97 320 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 LKAAEAR1Q8TD35 194 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 CD300AQ9UGN4 299 aa20.67■□□□□ 0.9
TM9SF3-201ENST00000371142 GABRPO00591 440 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 PRDX1Q06830 199 aaKnown RBP20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 SLC14A1Q13336 389 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 CEPT1Q9Y6K0 416 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 CEBPZOSA8MTT3 80 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 GASTP01350 101 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 FAM160A2Q8N612 972 aaPredicted RBP20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 ZNF225Q9UK10 706 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 FOXE1O00358 373 aaPredicted RBP20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 IFNA17P01571 189 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 TPT1P13693 172 aaKnown RBP20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 GJA4P35212 333 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 MRPS10P82664 201 aaKnown RBP20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 BEX5Q5H9J7 111 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 TEX19Q8NA77 164 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 RAB4AP20338 218 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 SPCS2Q15005 226 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 METAP1DQ6UB28 335 aaPredicted RBP20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 HCFC2Q9Y5Z7 792 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 CER1O95813 267 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 CLDN6P56747 220 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 SLC14A2Q15849 920 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 VHLLQ6RSH7 139 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 STEAP2Q8NFT2 490 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 INPP5EQ9NRR6 644 aa20.66■□□□□ 0.9
TM9SF3-201ENST00000371142 CHATP28329 748 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 SSTR2P30874 369 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 HOXC13P31276 330 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 UBE2NLQ5JXB2 153 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 BLACEA4D250 179 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 RFLNAQ6ZTI6 216 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 FCRLAQ7L513 359 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 SLC35F3Q8IY50 421 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 METTL4Q8N3J2 472 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 KLHL42Q9P2K6 505 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 HIDE1A8MVS5 230 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms