RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 C7orf57Q8NEG2 295 aa16.66■□□□□ 0.26
UBQLN4-201ENST00000368309 LRIT1Q9P2V4 623 aa16.66■□□□□ 0.26
UBQLN4-201ENST00000368309 IER3IP1Q9Y5U9 82 aa16.66■□□□□ 0.26
UBQLN4-201ENST00000368309 SLC9B1P1A6NJY1 282 aa16.66■□□□□ 0.26
UBQLN4-201ENST00000368309 B4DGG1 531 aa16.66■□□□□ 0.26
UBQLN4-201ENST00000368309 THBS2P35442 1172 aa16.66■□□□□ 0.26
UBQLN4-201ENST00000368309 MRPS21P82921 87 aaKnown RBP16.66■□□□□ 0.26
UBQLN4-201ENST00000368309 CDK10Q15131 360 aa16.66■□□□□ 0.26
UBQLN4-201ENST00000368309 DUSP18Q8NEJ0 188 aa16.66■□□□□ 0.26
UBQLN4-201ENST00000368309 ACOT12Q8WYK0 555 aa16.66■□□□□ 0.26
UBQLN4-201ENST00000368309 NECTIN4Q96NY8 510 aa16.66■□□□□ 0.26
UBQLN4-201ENST00000368309 CD207Q9UJ71 328 aa16.66■□□□□ 0.26
UBQLN4-201ENST00000368309 GPALPP1Q8IXQ4 340 aa16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 YIPF7Q8N8F6 280 aa16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 PGLYRP3Q96LB9 341 aa16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 TRPV5Q9NQA5 729 aa16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 CYSLTR2Q9NS75 346 aa16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 A0A0B4J203 849 aa16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 SLC6A6P31641 620 aa16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 TALDO1P37837 337 aa16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 MLLT3P42568 568 aaPredicted RBP16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 RABIFP47224 123 aa16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 SF3A2Q15428 464 aaKnown RBP16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 PARGQ86W56 976 aa16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 MCATQ8IVS2 390 aaKnown RBP16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 ASCC1Q8N9N2 400 aaKnown RBP16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 OR4C3Q8NH37 302 aa16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 RNF170Q96K19 258 aa16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 INPP5EQ9NRR6 644 aa16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 FBXL21Q9UKT6 434 aa16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 CYP8B1Q9UNU6 501 aa16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 HS3ST3A1Q9Y663 406 aa16.65■□□□□ 0.26
UBQLN4-201ENST00000368309 SERPINI2O75830 405 aa16.64■□□□□ 0.26
UBQLN4-201ENST00000368309 TFP02787 698 aa16.64■□□□□ 0.26
UBQLN4-201ENST00000368309 AGFG1P52594 562 aaKnown RBP16.64■□□□□ 0.26
UBQLN4-201ENST00000368309 Q5BKY6 102 aa16.64■□□□□ 0.26
UBQLN4-201ENST00000368309 ZNRF4Q8WWF5 429 aa16.64■□□□□ 0.26
UBQLN4-201ENST00000368309 THAP7Q9BT49 309 aaPredicted RBP16.64■□□□□ 0.26
UBQLN4-201ENST00000368309 TRIM2Q9C040 744 aa16.64■□□□□ 0.26
UBQLN4-201ENST00000368309 MSRAQ9UJ68 235 aa16.64■□□□□ 0.26
UBQLN4-201ENST00000368309 MCIDASD6RGH6 385 aa16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 THEGLP0DJG4 465 aa16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 PPM1FP49593 454 aaPredicted RBP16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 NPSR1Q6W5P4 371 aa16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 GPR135Q8IZ08 494 aa16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 ZNF426Q9BUY5 554 aa16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 RPS6KB2Q9UBS0 482 aa16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 KIR2DS5A0A0G2JLQ3 304 aa16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 A0A0G2JNG1 304 aa16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 KIR2DS3K7RE56 304 aa16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 HLA-DMAP28067 261 aa16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 RPL4P36578 427 aaKnown RBP16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 RIN1Q13671 783 aa16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 KIR2DS5Q14953 304 aa16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 NDUFA5Q16718 116 aa16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 RNASE12Q5GAN4 147 aaKnown RBP16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 LRRC28Q86X40 367 aaPredicted RBP16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 ZC3HAV1LQ96H79 300 aaKnown RBP16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 VSTM2LQ96N03 204 aa16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 ABHD1Q96SE0 405 aa16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 POLE3Q9NRF9 147 aa16.64■□□□□ 0.25
UBQLN4-201ENST00000368309 PRAMEF26H0Y7S4 382 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 EEF1E1O43324 174 aaKnown RBP16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 IFNGP01579 166 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 MAOAP21397 527 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 PTBP1P26599 531 aaKnown RBP eCLIP16.63■□□□□ 0.259e-7■■■□□ 15.4
UBQLN4-201ENST00000368309 FZD2Q14332 565 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 GATSQ8NAP1 163 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 TRMT10AQ8TBZ6 339 aaKnown RBP16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 TOE1Q96GM8 510 aaKnown RBP16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 SEMA6CQ9H3T2 930 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 MRPS7Q9Y2R9 242 aaKnown RBP16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 ALPK2Q86TB3 2170 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 SRP9P49458 86 aaKnown RBP16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 GPR176Q14439 515 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 DMKNQ6E0U4 476 aaPredicted RBP16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 KRT74Q7RTS7 529 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 GALNT9Q9HCQ5 603 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 OR10H1Q9Y4A9 318 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 A0A0G2JK05 382 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 SPTY2D1-AS1A0A0U1RR47 76 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 YES1P07947 543 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 S100A1P23297 94 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 MAZP56270 477 aaKnown RBP16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 ARHGAP11AQ6P4F7 1023 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 ULK3Q6PHR2 472 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 DNAJC5GQ8N7S2 189 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 OR5H6Q8NGV6 325 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 ZDHHC1Q8WTX9 485 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 PMM1Q92871 262 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 NMNAT3Q96T66 252 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 LMF2Q9BU23 707 aaKnown RBP16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 ERVK-19Q9WJR5 959 aa16.63■□□□□ 0.25
UBQLN4-201ENST00000368309 INMT-MINDY4F8WBC2 141 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 SMLR1H3BR10 107 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 PITPNBP48739 271 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 CLDN20P56880 219 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 LYPD4Q6UWN0 246 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 GRAMD2AQ8IUY3 354 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 LSMEM1Q8N8F7 131 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms