RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 OR10H3O60404 316 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 HCN1O60741 890 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 IGHG4P01861 327 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 ELK1P19419 428 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 GABRR1P24046 479 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 NMT1P30419 496 aaKnown RBP2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 PTGDSP41222 190 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 DAP3P51398 398 aaKnown RBP2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 GBX2P52951 348 aaPredicted RBP2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 ZNF45Q02386 682 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 IL24Q13007 206 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 GRB7Q14451 532 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 OR2G6Q5TZ20 316 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 OTPQ5XKR4 325 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 CCDC137Q6PK04 289 aaKnown RBP2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 UNQ9370/PRO34162Q6UXP9 181 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 CCDC80Q76M96 950 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 PPP1R27Q86WC6 154 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 BBS1Q8NFJ9 593 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 FAM110BQ8TC76 370 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 CHCHD10Q8WYQ3 142 aaPredicted RBP2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 RAPGEF5Q92565 580 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 FRAT1Q92837 279 aaPredicted RBP2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 RPUSD4Q96CM3 377 aaKnown RBP2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 C7orf34Q96L11 122 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 PGLYRP4Q96LB8 373 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 NIPSNAP3BQ9BS92 247 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 NICN1Q9BSH3 213 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 LRRN3Q9H3W5 708 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 NANSQ9NR45 359 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 TBK1Q9UHD2 729 aa2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 COL16A1Q07092 1604 aaPredicted RBP2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 PHF3Q92576 2039 aaKnown RBP2.37□□□□□ -2.03
ECHDC1-201ENST00000368287 GTF3C1Q12789 2109 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 PTCH1Q13635 1447 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 IGHV7-81A0A0B4J1V7 117 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 GPR89AB7ZAQ6 455 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 RGS16O15492 202 aaPredicted RBP2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 EMC8O43402 210 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 TPST2O60704 377 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 UGT2B17O75795 530 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 IGHDP01880 384 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 OPN1MWP04001 364 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 GPR89BP0CG08 455 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 ZNF853P0CG23 659 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 OPN1MW2P0DN77 364 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 OPN1MW3P0DN78 364 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 NPR2P20594 1047 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 HMGB2P26583 209 aaKnown RBP2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 NTSP30990 170 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 CAV2P51636 162 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 ACTR1AP61163 376 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 GNB2P62879 340 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 GPM6BQ13491 265 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 VGLL4Q14135 290 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 NSUN5P1Q3KNT7 163 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 MAJINQ3KP22 176 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 UQCC3Q6UW78 93 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 ACOT7LQ6ZUV0 252 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 Q6ZVH6 145 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 ERI1Q8IV48 349 aaKnown RBP2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 NRMQ8IXM6 262 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 ZNF100Q8IYN0 542 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 MTURNQ8N3F0 131 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 TMEM252Q8N6L7 170 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 OR5D13Q8NGL4 314 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 TRMT10AQ8TBZ6 339 aaKnown RBP2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 C7orf33Q8WU49 177 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 RLN3Q8WXF3 142 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 LINC00167Q96N53 147 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 MTMR9Q96QG7 549 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 SMIM14Q96QK8 99 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 PSKH2Q96QS6 385 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 NPAS2Q99743 824 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 GAL3ST1Q99999 423 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 SLC35A5Q9BS91 424 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 ZNF385DQ9H6B1 395 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 APMAPQ9HDC9 416 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 MARCH5Q9NX47 278 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 HOXC10Q9NYD6 342 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 RPS6KB2Q9UBS0 482 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 PHF11Q9UIL8 331 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 CLEC4AQ9UMR7 237 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 RPH3ALQ9UNE2 315 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 TTC21BQ7Z4L5 1316 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 CLSPNQ9HAW4 1339 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
ECHDC1-201ENST00000368287 ATRXP46100 2492 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 A0A0G2JLM5 398 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 A0A0J9YXY3 114 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 TRDCB7Z8K6 153 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 TRIM49D1C9J1S8 452 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 PANO1I0J062 215 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 BBOX1O75936 387 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 STAMBPO95630 424 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 LGI1O95970 557 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 RNH1P13489 461 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 ZNF44P15621 663 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 IMPDH1P20839 514 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 FUT3P21217 361 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms