RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 MEIOCA2RUB1 952 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 OR7A17O14581 309 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ARPC3O15145 178 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 GCGP01275 180 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 BMP8BP34820 402 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF705AQ6ZN79 300 aaPredicted RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 BMP8AQ7Z5Y6 402 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ZDHHC22Q8N966 263 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 UHRF2Q96PU4 802 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SMOC2Q9H3U7 446 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 RENP00797 406 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ARSBP15848 533 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 DAP3P51398 398 aaKnown RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 RPE65Q16518 533 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ESPNLQ6ZVH7 1005 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 PAQR7Q86WK9 346 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SGPP2Q8IWX5 399 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SPATA33Q96N06 139 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF816-ZNF321PA0A0X1KG74 233 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 GABARAPH6UMI1 98 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TRAF3IP2O43734 574 aaPredicted RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 PLOD3O60568 738 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 PRH1P02810 166 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 PGA4P0DJD7 388 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 PGA5P0DJD9 388 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 LAMP2P13473 410 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ARSJQ5FYB0 599 aaPredicted RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SENP5Q96HI0 755 aaPredicted RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 H0YIV9 168 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 FOLR2P14207 255 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 CLK2P49760 499 aaKnown RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 POLR2GP62487 172 aaKnown RBP eCLIP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ASTLQ6HA08 431 aaPredicted RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 RASL11AQ6T310 242 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 MAMDC4Q6UXC1 1216 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SPPL2CQ8IUH8 684 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 C1orf216Q8TAB5 229 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 A4GALTQ9NPC4 353 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 IQGAP1P46940 1657 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 DAPL1A0PJW8 107 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 A6NLC8 198 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 CASP3P42574 277 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TLE2Q04725 743 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 GCNT7Q6ZNI0 430 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 OR4E2Q8NGC2 313 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SLC7A5P2Q9GIP4 190 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TMEM238LA0A1B0GVL6 79 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 A6NJY4 79 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 CLDN5O00501 218 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 AHRP35869 848 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 MTSS1LQ765P7 747 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ANKRD46Q86W74 232 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 OR5A2Q8NGI9 324 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SYT11Q9BT88 431 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SLC17A9Q9BYT1 436 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 A0A1B0GW64 132 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TXNL1O43396 289 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 CSNK2A2P19784 350 aaPredicted RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TAS2R41P59536 307 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF155Q12901 538 aaPredicted RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 HIST1H1TP22492 207 aaPredicted RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 HOXD11P31277 338 aaPredicted RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 Q499Y3 187 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SULF2Q8IWU5 870 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 GNPDA2Q8TDQ7 276 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 DYRK2Q92630 601 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 PIK3IP1Q96FE7 263 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 PELI2Q9HAT8 420 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ANHXE9PGG2 379 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 H3BMH7 237 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 NTSR2O95665 410 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 MTAPQ13126 283 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 LEXMQ3ZCV2 418 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 COL5A1-AS1Q5SY13 56 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF574Q6ZN55 896 aaPredicted RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SLC32A1Q9H598 525 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 NRIP3Q9NQ35 241 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF736B4DX44 427 aaPredicted RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 E5RJQ4 531 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ALDOAP04075 364 aaKnown RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF91Q05481 1191 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 CRB2Q5IJ48 1285 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 PAPPA-AS1Q5QFB9 102 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TMPRSS9Q7Z410 1059 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 OR6C4Q8NGE1 309 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 COPS7AQ9UBW8 275 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 OR2A25A4D2G3 310 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 GADD45GO95257 159 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 APOC3P02656 99 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 CTSLP07711 333 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 PTH2RP49190 550 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 INAVAQ3KP66 663 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 PHYKPLQ8IUZ5 450 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 CELF5Q8N6W0 485 aaKnown RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 NECAP1Q8NC96 275 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SPXQ9BT56 116 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 GAGE1Q13065 139 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 PIMREGQ9BSJ6 248 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 A0A087WWC5 75 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TCRBV5S4A2TA0A5A2 114 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms