RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ARSKQ6UWY0 536 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 ZNF283Q8N7M2 679 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 TMEM168Q9H0V1 697 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 BCL2L10Q9HD36 194 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 HIF3AQ9Y2N7 669 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 PTNP21246 168 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 SSBP1Q04837 148 aaKnown RBP11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 FOXRED2Q8IWF2 684 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 OR4M1Q8NGD0 313 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 LKAAEAR1Q8TD35 194 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 CREB3L4Q8TEY5 395 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 CDS1Q92903 461 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 SGPP1Q9BX95 441 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 NUDT19A8MXV4 375 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 SCGB1D2O95969 90 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 MT-ND4P03905 459 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 ZNF169Q14929 603 aaPredicted RBP11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 CCDC71LQ8N9Z2 235 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 CD300LFQ8TDQ1 290 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 DDIT4LQ96D03 193 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 NME7Q9Y5B8 376 aa11.01□□□□□ -0.65
CDC42BPA-202ENST00000366764 F8W036 122 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 CASRP41180 1078 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 MC2RQ01718 297 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 C12orf45Q8N5I9 185 aaPredicted RBP11□□□□□ -0.65
CDC42BPA-202ENST00000366764 GOT1L1Q8NHS2 421 aaPredicted RBP11□□□□□ -0.65
CDC42BPA-202ENST00000366764 ABHD4Q8TB40 342 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 LGALS14Q8TCE9 139 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 SCPEP1Q9HB40 452 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 C1GALT1Q9NS00 363 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 SERTM1A2A2V5 107 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 NPPBP16860 134 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 TAS2R46P59540 309 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 SIM1P81133 766 aaPredicted RBP11□□□□□ -0.65
CDC42BPA-202ENST00000366764 AQP6Q13520 282 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 CAMKMTQ7Z624 323 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 GHSRQ92847 366 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 EGLN3Q9H6Z9 239 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 BMPR1AP36894 532 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 CCR9P51686 369 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 GALK2Q01415 458 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 MANEAQ5SRI9 462 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 FAM122CQ6P4D5 195 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 GDPD3Q7L5L3 318 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 ANGPTL6Q8NI99 470 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 J3KTA2 159 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 APEX1P27695 318 aaKnown RBP11□□□□□ -0.65
CDC42BPA-202ENST00000366764 GDNFP39905 211 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 CHAF1BQ13112 559 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 GAB1Q13480 694 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 CHRDL2Q6WN34 429 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 DPY19L2P2Q6ZN68 376 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 CDCA3Q99618 268 aaPredicted RBP11□□□□□ -0.65
CDC42BPA-202ENST00000366764 SLC5A7Q9GZV3 580 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 HEPACAM2A8MVW5 462 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 SPDEFO95238 335 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 WDPCPO95876 746 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 ACRP10323 421 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 SCGB1C1Q8TD33 95 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 SORCS2Q96PQ0 1159 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 ZIC5Q96T25 663 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 ZNF416Q9BWM5 594 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 GSX2Q9BZM3 304 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 RCE1Q9Y256 329 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 CORINQ9Y5Q5 1042 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 GABARAPH6UMI1 98 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 FRS3O43559 492 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 HLA-AP01891 365 aaKnown RBP11□□□□□ -0.65
CDC42BPA-202ENST00000366764 IL13RA1P78552 427 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 SPIN3Q5JUX0 258 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 ZNF546Q86UE3 836 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 SLC51BQ86UW2 128 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 DCNP07585 359 aaKnown RBP11□□□□□ -0.65
CDC42BPA-202ENST00000366764 TYRP1P17643 537 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 CCDC190Q86UF4 302 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 CCDC54Q8NEL0 328 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 C7orf34Q96L11 122 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 STACQ99469 402 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 GLIPR2Q9H4G4 154 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 SIP14410 1827 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 SLC9B1P1A6NJY1 282 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 FABP7O15540 132 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 PLATP00750 562 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 CHRNEQ04844 493 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 DPTQ07507 201 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 SPATC1Q76KD6 591 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 ZNF595Q8IYB9 648 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 STK35Q8TDR2 534 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 A0A1B0GTW7 788 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 DUX1O43812 170 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 LTBQ06643 244 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 MGAT3Q09327 533 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 AWAT2Q6E213 333 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 NKAIN3Q8N8D7 197 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 OR5D14Q8NGL3 314 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 WDFY2Q96P53 400 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 CXCL16Q9H2A7 254 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 IL23AQ9NPF7 189 aa11□□□□□ -0.65
CDC42BPA-202ENST00000366764 SLC5A10A0PJK1 596 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 GJE1A6NN92 205 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms