RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 MRPS25P82663 173 aaKnown RBP7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 NAAAQ02083 359 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 C2orf80Q0P641 193 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 SELENBP1Q13228 472 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 SCGB2A2Q13296 93 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 PDK3Q15120 406 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 ATP6AP1LQ52LC2 224 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 KLHL26Q53HC5 615 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 GRTP1Q5TC63 336 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 ANKRD26P1Q6NSI1 321 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 METTL2BQ6P1Q9 378 aaKnown RBP7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 GALNT18Q6P9A2 607 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 TMPPEQ6ZT21 453 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 MTDHQ86UE4 582 aaKnown RBP7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 RELL1Q8IUW5 271 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 CTAGE3PQ8IX95 158 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 C17orf78Q8N4C9 275 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 OR51F2Q8NH61 342 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 PHOSPHO1Q8TCT1 267 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 ACTRT1Q8TDG2 376 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 ARL5BQ96KC2 179 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 ZNF48Q96MX3 618 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 SLC38A2Q96QD8 506 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 RASSF4Q9H2L5 321 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 TAS2R7Q9NYW3 318 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 DCTN4Q9UJW0 460 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 SOX21Q9Y651 276 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 KCNE3Q9Y6H6 103 aa7.3□□□□□ -1.24
HMGB1P39-201ENST00000366304 TRAV20A0A0B4J274 112 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 ZNF503-AS2A6NEH8 195 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 NPIPB9F8W1W9 429 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 SCDO00767 359 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 PLPP2O43688 288 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 MRPL33O75394 65 aaKnown RBP7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 PRSS23O95084 383 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 RPLP1P05386 114 aaKnown RBP7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 ANXA4P09525 319 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 SAGP10523 405 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 PRPS2P11908 318 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 DDX5P17844 614 aaKnown RBP7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 CDH2P19022 906 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 OMGP23515 440 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 CDC25BP30305 580 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 P2RX1P51575 399 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 PRKAG1P54619 331 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 PRPS1P60891 318 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 BTKQ06187 659 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 ILF2Q12905 390 aaKnown RBP7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 HSPB3Q12988 150 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 HEPACAMQ14CZ8 416 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 QPRTQ15274 297 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 FAM83EQ2M2I3 478 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 TIGD2Q4W5G0 525 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 ZNF385BQ569K4 471 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 MROH9Q5TGP6 573 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 LEG1Q6P5S2 330 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 ANKRD16Q6P6B7 361 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 UGT2A3Q6UWM9 527 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 LRIG3Q6UXM1 1119 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 CYS1Q717R9 158 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 ZNF771Q7L3S4 317 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 LINGO2Q7L985 606 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 SPATA21Q7Z572 469 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 MISPQ8IVT2 679 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 BCL6BQ8N143 479 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 BPIFB2Q8N4F0 458 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 ZIC4Q8N9L1 334 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 MNS1Q8NEH6 495 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 C1orf162Q8NEQ5 155 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 CEP70Q8NHQ1 597 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 RFWD2Q8NHY2 731 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 CDC26Q8NHZ8 85 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 PYROXD1Q8WU10 500 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 CIDECQ96AQ7 238 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 OSBPL9Q96SU4 736 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 KATNB1Q9BVA0 655 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 SLITRK2Q9H156 845 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 NELFAQ9H3P2 528 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 C3orf14Q9HBI5 128 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 DDX28Q9NUL7 540 aaKnown RBP7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 EMC3Q9P0I2 261 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 TXNDC16Q9P2K2 825 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 CRNNQ9UBG3 495 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 PCDHB14Q9Y5E9 798 aa7.29□□□□□ -1.24
HMGB1P39-201ENST00000366304 A0A096LPK6 155 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 CENPVL1A0A0U1RR11 272 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 LOC100996750A0A140TA64 210 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 STX16-NPEPL1H3BU86 382 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 SULT2B1O00204 365 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 STX16O14662 325 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 DNAJA2O60884 412 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 BCAS1O75363 584 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 RP2O75695 350 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 NCR1O76036 304 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 SLITRK5O94991 958 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 BCL10O95999 233 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 OTCP00480 354 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 IGLV1-44P01699 117 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 TFP02787 698 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 PRB2P02812 416 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms