RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 TMEM9BQ9NQ34 198 aa18.91■□□□□ 0.62
CDC42BPB-201ENST00000361246 YES1P07947 543 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 SNTB2Q13425 540 aaKnown RBP18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 DUSP6Q16828 381 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 C3P1Q6ZMU1 363 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 SLC37A2Q8TED4 501 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 VIRMAQ69YN4 1812 aaKnown RBP18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 NRXN3Q9Y4C0 1643 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 PRAMEF27A3QJZ7 478 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 M0R1B8 84 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 OR8U9P0C7N5 309 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 CAMLGP49069 296 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 HBA1P69905 142 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 MZT1Q08AG7 82 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 SEMA3BQ13214 749 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 USF2Q15853 346 aaPredicted RBP18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 PRAMEF9Q5VWM5 478 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 OR13J1Q8NGT2 312 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 ARSGQ96EG1 525 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 PLCH1Q4KWH8 1693 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 LRRC37A3O60309 1634 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 FOXE1O00358 373 aaPredicted RBP18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 AADACL4Q5VUY2 407 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 SLC46A3Q7Z3Q1 461 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 ZNF740Q8NDX6 193 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 CCL4L1Q8NHW4 92 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 LGALS4P56470 323 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 ESPNLQ6ZVH7 1005 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 MINDY1Q8N5J2 469 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 KLRC4-KLRK1H3BQV0 150 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 ZNF593O00488 134 aaPredicted RBP18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 VWA2Q5GFL6 755 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 MKXQ8IYA7 352 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 MAFIPQ8WZ33 124 aa18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 YTHDF1Q9BYJ9 559 aaKnown RBP18.9■□□□□ 0.62
CDC42BPB-201ENST00000361246 CLDN10P78369 228 aa18.89■□□□□ 0.62
CDC42BPB-201ENST00000361246 TMEM71Q6P5X7 295 aa18.89■□□□□ 0.62
CDC42BPB-201ENST00000361246 ALKAL1Q6UXT8 129 aa18.89■□□□□ 0.62
CDC42BPB-201ENST00000361246 SNX18Q96RF0 628 aa18.89■□□□□ 0.62
CDC42BPB-201ENST00000361246 BTNL2Q9UIR0 455 aa18.89■□□□□ 0.62
CDC42BPB-201ENST00000361246 B4DXG7 233 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 NOVA1P51513 510 aaKnown RBP18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 EFNA3P52797 238 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 RAB41Q5JT25 222 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 MAGIXQ9H6Y5 334 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 EBF1Q9UH73 591 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 PCGF2P35227 344 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 PHC2Q8IXK0 858 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 MEPEQ9NQ76 525 aaPredicted RBP18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 WIF1Q9Y5W5 379 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 M0R233 179 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 B4GAT1O43505 415 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 GNB3P16520 340 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 SMAD4Q13485 552 aaKnown RBP18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 MPP7Q5T2T1 576 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 OR4F15Q8NGB8 312 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 TMEM202A6NGA9 273 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 EPHA5P54756 1037 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 ZNF595Q8IYB9 648 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 ASB11Q8WXH4 323 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 DCUN1D4Q92564 292 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 SULT4A1Q9BR01 284 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 NARFLQ9H6Q4 476 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 TNFRSF19Q9NS68 423 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 VAPAQ9P0L0 249 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 POM121BA6NF01 834 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 HLA-DMAP28067 261 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 BMXP51813 675 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 SIX1Q15475 284 aaPredicted RBP18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 SBSNQ6UWP8 590 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 CCDC71LQ8N9Z2 235 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 GPR150Q8NGU9 434 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 ZFPM2Q8WW38 1151 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 RLIMQ9NVW2 624 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 SLC23A2Q9UGH3 650 aa18.89■□□□□ 0.61
CDC42BPB-201ENST00000361246 CD300LBA8K4G0 201 aa18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 E7ESA3 106 aa18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 DTWD1Q8N5C7 304 aa18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 OR8J2Q8NGG1 315 aa18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 OR1E3Q8WZA6 343 aa18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 ZBED3Q96IU2 234 aaPredicted RBP18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 THAP10Q9P2Z0 257 aaPredicted RBP18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 ITGB4P16144 1822 aa18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 RSPO2Q6UXX9 243 aaPredicted RBP18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 HES7Q9BYE0 225 aa18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 MYNNQ9NPC7 610 aa18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 WASH6PQ9NQA3 447 aa18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 LILRB5O75023 590 aa18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 LEXMQ3ZCV2 418 aa18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 SYT3Q9BQG1 590 aa18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 MAGED1Q9Y5V3 778 aaPredicted RBP18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 ARID1BQ8NFD5 2236 aaPredicted RBP18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 HOXC13P31276 330 aa18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 GABRA5P31644 462 aa18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 SMOXQ9NWM0 555 aa18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 PRRT4C9JH25 899 aa18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 ALOX12BO75342 701 aa18.88■□□□□ 0.61
CDC42BPB-201ENST00000361246 FER1L6Q2WGJ9 1857 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms