RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 HTR3AP46098 478 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 ATP4BP51164 291 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 DPPA2Q7Z7J5 298 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 OR9A2Q8NGT5 310 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 RDH11Q8TC12 318 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 C16orf78Q8WTQ4 265 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 KLHL29Q96CT2 875 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 PAIP2Q9BPZ3 127 aaKnown RBP5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 BEX1Q9HBH7 125 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 PDP1Q9P0J1 537 aaPredicted RBP5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 CCL27Q9Y4X3 112 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 SPIN1Q9Y657 262 aaPredicted RBP5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 DNAH6Q9C0G6 4158 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 C17orf51A8MQB3 221 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 VSTM5A8MXK1 200 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 TMEM229AB2RXF0 380 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 ATP6V1G2-DDX39BF2Z307 99 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 hCG_2039718K7EN88 272 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 CCNT2O60583 730 aaKnown RBP5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 TSPAN9O75954 239 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 IGHMP01871 453 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 FAM157BP0CG42 384 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 ACP2P11117 423 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 STMN1P16949 149 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 TIA1P31483 386 aaKnown RBP eCLIP5.11□□□□□ -1.599e-7■■□□□ 13.1
CDC42SE2-201ENST00000360515 LOXL3P58215 753 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 TRIP10Q15642 601 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 RELL1Q8IUW5 271 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 UBQLNLQ8IYU4 475 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 MOAP1Q96BY2 351 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 ZNF524Q96C55 264 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 LRR1Q96L50 414 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 MS4A4EQ96PG1 132 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 ZNF382Q96SR6 550 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 PKP2Q99959 881 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 KCNF1Q9H3M0 494 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 PIGUQ9H490 435 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 C12orf49Q9H741 205 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 C1RLQ9NZP8 487 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 CGGBP1Q9UFW8 167 aaPredicted RBP5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 PACSIN2Q9UNF0 486 aaPredicted RBP5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 MTO1Q9Y2Z2 717 aaKnown RBP5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 DTNAQ9Y4J8 743 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 INSIG2Q9Y5U4 225 aa5.11□□□□□ -1.59
CDC42SE2-201ENST00000360515 IGHV2OR16-5A0A0B4J2B6 119 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 LRP5LA4QPB2 252 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 SKAP2O75563 359 aaPredicted RBP5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 ERAL1O75616 437 aaKnown RBP5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 ZNF432O94892 652 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 KLHL2O95198 593 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 ENO1P06733 434 aaKnown RBP5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 PRPS2P11908 318 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 ZNF14P17017 642 aaPredicted RBP5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 GPC1P35052 558 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 Q6YL49 198 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 FN3KRPQ9HA64 309 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 ZNF225Q9UK10 706 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 SNX6Q9UNH7 406 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 RNF11Q9Y3C5 154 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 GLOD5A6NK44 160 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 TRIM49D1C9J1S8 452 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 C3orf84H3BNL1 204 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 IFNL4K9M1U5 179 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 GPR37O15354 613 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 NDUFB5O43674 189 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 FGGP02679 453 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 OPN1MWP04001 364 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 KRT16P08779 473 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 OPN1MW2P0DN77 364 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 OPN1MW3P0DN78 364 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 ZNF83P51522 516 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 SNX1Q13596 522 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 CD226Q15762 336 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 TTC19Q6DKK2 380 aaPredicted RBP5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 C16orf87Q6PH81 154 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 C6orf89Q6UWU4 347 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 REXO5Q96IC2 774 aaKnown RBP5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 GLIPR2Q9H4G4 154 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 IPPKQ9H8X2 491 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 NPHS2Q9NP85 383 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 CD274Q9NZQ7 290 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 VPS29Q9UBQ0 182 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 CLEC4AQ9UMR7 237 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 CARD8Q9Y2G2 431 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 SLC22A23A1A5C7 686 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 FRS3O43559 492 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 VAMP5O95183 116 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 CECR9P0C854 216 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 THBS4P35443 961 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 MTNR1AP48039 350 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 ZNF133P52736 654 aaPredicted RBP5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 CBFBQ13951 182 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 IQCCQ4KMZ1 466 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 RUSC1-AS1Q66K80 236 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 CDC73Q6P1J9 531 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 PAQR6Q6TCH4 344 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 SLC46A3Q7Z3Q1 461 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 CCDC116Q8IYX3 515 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 TEX9Q8N6V9 391 aa5.1□□□□□ -1.59
CDC42SE2-201ENST00000360515 OR4C3Q8NH37 302 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms