RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 FABP7O15540 132 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 CRTAPO75718 401 aaPredicted RBP12.78□□□□□ -0.36
VCP-201ENST00000358901 IGFBP1P08833 259 aaPredicted RBP12.78□□□□□ -0.36
VCP-201ENST00000358901 SIRPAP78324 504 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 CSNK1G2P78368 415 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 BLOC1S1P78537 153 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 HTRA3P83110 453 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 SFXN4Q6P4A7 337 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 RPL22L1Q6P5R6 122 aaKnown RBP12.78□□□□□ -0.36
VCP-201ENST00000358901 CD163Q86VB7 1156 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 ZSCAN1Q8NBB4 408 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 TM9SF4Q92544 642 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 GALNT9Q9HCQ5 603 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 CBLCQ9ULV8 474 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 UBE2J1Q9Y385 318 aaPredicted RBP12.78□□□□□ -0.36
VCP-201ENST00000358901 DNAJC13O75165 2243 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 POM121CA8CG34 1229 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 F5H5K5 113 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 SYT5O00445 386 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 KLK8O60259 260 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 MAKP20794 623 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 TEAD1P28347 426 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 SPOCK1Q08629 439 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 FAM78AQ5JUQ0 283 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 LCN10Q6JVE6 187 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 TSSK4Q6SA08 328 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 LACC1Q8IV20 430 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 SNIP1Q8TAD8 396 aaKnown RBP12.78□□□□□ -0.36
VCP-201ENST00000358901 ABHD4Q8TB40 342 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 DCUN1D4Q92564 292 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 CDC6Q99741 560 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 UBQLN3Q9H347 655 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 SIAEQ9HAT2 523 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 UBQLN4Q9NRR5 601 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 ZNF281Q9Y2X9 895 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 OPN1LWP04000 364 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 PSMB1P20618 241 aaKnown RBP12.78□□□□□ -0.36
VCP-201ENST00000358901 RBMS1P29558 406 aaKnown RBP12.78□□□□□ -0.36
VCP-201ENST00000358901 DLSTP36957 453 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 GDNFP39905 211 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 VASPP50552 380 aaPredicted RBP12.78□□□□□ -0.36
VCP-201ENST00000358901 CYCSP99999 105 aaKnown RBP12.78□□□□□ -0.36
VCP-201ENST00000358901 LTBQ06643 244 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 RIN1Q13671 783 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 GPR18Q14330 331 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 SLC35F3Q8IY50 421 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 MMP21Q8N119 569 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 ARL14Q8N4G2 192 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 RLN3Q8WXF3 142 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 RHNO1Q9BSD3 238 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 ELOVL3Q9HB03 270 aa12.78□□□□□ -0.36
VCP-201ENST00000358901 SPATA6Q9NWH7 488 aaPredicted RBP12.78□□□□□ -0.36
VCP-201ENST00000358901 SLC5A10A0PJK1 596 aa12.77□□□□□ -0.36
VCP-201ENST00000358901 PRAMEF26H0Y7S4 382 aa12.77□□□□□ -0.36
VCP-201ENST00000358901 SLC6A12P48065 614 aa12.77□□□□□ -0.36
VCP-201ENST00000358901 IL13RA1P78552 427 aa12.77□□□□□ -0.36
VCP-201ENST00000358901 REEP5Q00765 189 aa12.77□□□□□ -0.36
VCP-201ENST00000358901 TNFRSF17Q02223 184 aa12.77□□□□□ -0.36
VCP-201ENST00000358901 SF3B4Q15427 424 aaKnown RBP eCLIP12.77□□□□□ -0.364e-7■■■■□ 25.3
VCP-201ENST00000358901 FCN2Q15485 313 aa12.77□□□□□ -0.36
VCP-201ENST00000358901 TMEM31Q5JXX7 168 aa12.77□□□□□ -0.36
VCP-201ENST00000358901 HENMT1Q5T8I9 393 aaKnown RBP12.77□□□□□ -0.36
VCP-201ENST00000358901 ABHD17CQ6PCB6 329 aa12.77□□□□□ -0.36
VCP-201ENST00000358901 RIMKLAQ8IXN7 391 aa12.77□□□□□ -0.36
VCP-201ENST00000358901 MFSD9Q8NBP5 474 aa12.77□□□□□ -0.36
VCP-201ENST00000358901 TMEM185AQ8NFB2 350 aa12.77□□□□□ -0.36
VCP-201ENST00000358901 PDXPQ96GD0 296 aa12.77□□□□□ -0.36
VCP-201ENST00000358901 TMEM168Q9H0V1 697 aa12.77□□□□□ -0.36
VCP-201ENST00000358901 EPHX3Q9H6B9 360 aa12.77□□□□□ -0.36
VCP-201ENST00000358901 PRSS16Q9NQE7 514 aa12.77□□□□□ -0.36
VCP-201ENST00000358901 CDHR4A6H8M9 788 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 KDM4EB2RXH2 506 aaPredicted RBP12.77□□□□□ -0.37
VCP-201ENST00000358901 K7ESM1 405 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 AGPAT2O15120 278 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 PEX14O75381 377 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 DIRAS3O95661 229 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 TSPAN12O95859 305 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 RAB40ALP0C0E4 278 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 OR8U9P0C7N5 309 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 VEGFBP49765 207 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 GK2Q14410 553 aaPredicted RBP12.77□□□□□ -0.37
VCP-201ENST00000358901 SYT14P1Q58G82 188 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 CHRDL2Q6WN34 429 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 C12orf45Q8N5I9 185 aaPredicted RBP12.77□□□□□ -0.37
VCP-201ENST00000358901 SCGB1C1Q8TD33 95 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 RAB40AQ8WXH6 277 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 TBC1D20Q96BZ9 403 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 ELP4Q96EB1 424 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 TXNDC15Q96J42 360 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 TAAR2Q9P1P5 351 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 KLF15Q9UIH9 416 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.77□□□□□ -0.37
VCP-201ENST00000358901 H7C1C5 153 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 IGLV3-27P01718 113 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 NPR2P20594 1047 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 ITGB8P26012 769 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 LCN6P62502 163 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 DLX2Q07687 328 aaPredicted RBP12.77□□□□□ -0.37
VCP-201ENST00000358901 RSU1Q15404 277 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 OR7A5Q15622 319 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms