RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 NIPAL2Q9H841 368 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 PLEKHJ1Q9NW61 149 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 TMEM212A6NML5 194 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 ZNF264O43296 627 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 ABLIM3O94929 683 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 SLC5A2P31639 672 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 UBE2NLQ5JXB2 153 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 TECPR1Q7Z6L1 1165 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 COMMD7Q86VX2 200 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 OR6V1Q8N148 313 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 C12orf45Q8N5I9 185 aaPredicted RBP10.96□□□□□ -0.65
COL9A1-202ENST00000357250 DTX3Q8N9I9 347 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 FAM83FQ8NEG4 500 aaPredicted RBP10.96□□□□□ -0.65
COL9A1-202ENST00000357250 NXPE3Q969Y0 559 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 TSPAN10Q9H1Z9 355 aaPredicted RBP10.96□□□□□ -0.65
COL9A1-202ENST00000357250 CUEDC1Q9NWM3 386 aaPredicted RBP10.96□□□□□ -0.65
COL9A1-202ENST00000357250 NCDNQ9UBB6 729 aa10.96□□□□□ -0.65
COL9A1-202ENST00000357250 GABRPO00591 440 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 ARPC1BO15143 372 aaKnown RBP10.96□□□□□ -0.66
COL9A1-202ENST00000357250 B4GAT1O43505 415 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 IFNA4P05014 189 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 OTX2P32243 289 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 FASLGP48023 281 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 NHSL2Q5HYW2 709 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 VRK2Q86Y07 508 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 TOE1Q96GM8 510 aaKnown RBP10.96□□□□□ -0.66
COL9A1-202ENST00000357250 TXNDC15Q96J42 360 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 SAGE1Q9NXZ1 904 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 ZNF226Q9NYT6 803 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 MMACHCQ9Y4U1 282 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 hCG_1807616A0A1W2PRN6 198 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 ARPC5O15511 151 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 LDB3O75112 727 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 GAAP10253 952 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 ICAM2P13598 275 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 EN2P19622 333 aaPredicted RBP10.96□□□□□ -0.66
COL9A1-202ENST00000357250 TACR1P25103 407 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 APLNRP35414 380 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 RPP30P78346 268 aaKnown RBP10.96□□□□□ -0.66
COL9A1-202ENST00000357250 TEKQ02763 1124 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 MGAT3Q09327 533 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 DUSP7Q16829 419 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 XKR7Q5GH72 579 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 MRPL2Q5T653 305 aaKnown RBP10.96□□□□□ -0.66
COL9A1-202ENST00000357250 SLC46A3Q7Z3Q1 461 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 ZNF695Q8IW36 515 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 BEST4Q8NFU0 473 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 OR5L1Q8NGL2 311 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 ELP4Q96EB1 424 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 CCNL2Q96S94 520 aaPredicted RBP10.96□□□□□ -0.66
COL9A1-202ENST00000357250 ARHGAP9Q9BRR9 750 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 NICN1Q9BSH3 213 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 HCAR1Q9BXC0 346 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 PLEK2Q9NYT0 353 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 SLAMF8Q9P0V8 285 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 HCFC2Q9Y5Z7 792 aa10.96□□□□□ -0.66
COL9A1-202ENST00000357250 H0YGG7 62 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 H3BQ06 376 aaPredicted RBP10.95□□□□□ -0.66
COL9A1-202ENST00000357250 PLATP00750 562 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 IFNA10P01566 189 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 SERPINE2P07093 398 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 DCNP07585 359 aaKnown RBP10.95□□□□□ -0.66
COL9A1-202ENST00000357250 MYOGP15173 224 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 FPR3P25089 353 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 DLSTP36957 453 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 DAPP51397 102 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 TUBB3Q13509 450 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 RFLNAQ6ZTI6 216 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 OLIG1Q8TAK6 271 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 ZFPM2Q8WW38 1151 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 FAM71F1Q96KD3 344 aaPredicted RBP10.95□□□□□ -0.66
COL9A1-202ENST00000357250 CNTNAP3BQ96NU0 1288 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 ADOQ96SZ5 270 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 KIF25Q9UIL4 384 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 UGT2A1Q9Y4X1 527 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 BRWD1Q9NSI6 2320 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 SLC16A7O60669 478 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 GABARAPO95166 117 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 SLC1A3P43003 542 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 HSD17B7P56937 341 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 TAS2R46P59540 309 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 CHRNEQ04844 493 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 ECH1Q13011 328 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 SPCS2Q15005 226 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 OR7A5Q15622 319 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 LRRC26Q2I0M4 334 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 SYT6Q5T7P8 510 aaPredicted RBP10.95□□□□□ -0.66
COL9A1-202ENST00000357250 TMEM64Q6YI46 380 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 CYP4V2Q6ZWL3 525 aaPredicted RBP10.95□□□□□ -0.66
COL9A1-202ENST00000357250 SLC16A9Q7RTY1 509 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 SLC2A12Q8TD20 617 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 ZNF436Q9C0F3 470 aaPredicted RBP10.95□□□□□ -0.66
COL9A1-202ENST00000357250 TAAR2Q9P1P5 351 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 CORINQ9Y5Q5 1042 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 ANKRD30BLA7E2S9 258 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 RFXAPO00287 272 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 GPR137BO60478 399 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 POLR2HP52434 150 aaKnown RBP10.95□□□□□ -0.66
COL9A1-202ENST00000357250 ATP1B3P54709 279 aa10.95□□□□□ -0.66
COL9A1-202ENST00000357250 CFAP77Q6ZQR2 320 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms