RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 RPS27AP62979 156 aaKnown RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 UBA52P62987 128 aaKnown RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 BDH1Q02338 343 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 KRT33BQ14525 404 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 GPNMBQ14956 572 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 ZC3H14Q6PJT7 736 aaKnown RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF704Q6ZNC4 412 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF620Q6ZNG0 422 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 MUC20Q8N307 709 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF614Q8N883 585 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 OR1S2Q8NGQ3 325 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 SUN3Q8TAQ9 357 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 ACOT11Q8WXI4 607 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 TRIM43Q96BQ3 446 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 TM4SF18Q96CE8 201 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 CD180Q99467 661 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF649Q9BS31 505 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 KRCC1Q9NPI7 259 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 SLC7A7Q9UM01 511 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 PLEKHM1Q9Y4G2 1056 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 ARID1AO14497 2285 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 PLXND1Q9Y4D7 1925 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 ANKRD61A6NGH8 418 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 OR6C65A6NJZ3 312 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 RIIAD1A6NNX1 92 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 SNRPGP15A8MWD9 76 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 PLPP2O43688 288 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 SULT1B1O43704 296 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 PRICKLE3O43900 615 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 FADS1O60427 444 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 AQP8O94778 261 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 OR2A4O95047 310 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 GTF2F2P13984 249 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 MST1P26927 711 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 HTR2AP28223 471 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 SSR2P43308 183 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 SOX2P48431 317 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 PRR5P85299 388 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 DHODHQ02127 395 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 CBFBQ13951 182 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 RBMS2Q15434 407 aaKnown RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 UNQ6126/PRO20091Q6UXV3 157 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 KRT77Q7Z794 578 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 ARL14Q8N4G2 192 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 FAM98AQ8NCA5 519 aaKnown RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 OR4C6Q8NH72 309 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 ZMYND19Q96E35 227 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 ARSGQ96EG1 525 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 SLC41A3Q96GZ6 507 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 SEC22AQ96IW7 307 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 OR2A7Q96R45 310 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 BCL2L14Q9BZR8 327 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 PITHD1Q9GZP4 211 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF334Q9HCZ1 680 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 NOX4Q9NPH5 578 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 GSN-AS1Q9NRJ2 163 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 FBXL4Q9UKA2 621 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 FBXL3Q9UKT7 428 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 PCDHB10Q9UN67 800 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 NLRC5Q86WI3 1866 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 SLC22A31A6NKX4 558 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 CDC42EP2O14613 210 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 GSTZ1O43708 216 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 NDUFB6O95139 128 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 ZDHHC11BP0C7U3 371 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 OR1D2P34982 312 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 CLDN2P57739 230 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 HTRA3P83110 453 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 GRB14Q14449 540 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF750Q32MQ0 723 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 PRAMEF14Q5SWL7 426 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 YOD1Q5VVQ6 348 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 LIN54Q6MZP7 749 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 TMEM71Q6P5X7 295 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 OR2W3Q7Z3T1 314 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 CDK20Q8IZL9 346 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 EIF4E3Q8N5X7 224 aaKnown RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 OR6K3Q8NGY3 331 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 COL26A1Q96A83 441 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 FBXO17Q96EF6 278 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 ZC3H10Q96K80 434 aaKnown RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 MS4A4EQ96PG1 132 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 TEAD3Q99594 435 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 PBX4Q9BYU1 374 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 CCDC86Q9H6F5 360 aaKnown RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 SIRT3Q9NTG7 399 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 MED17Q9NVC6 651 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 GPN3Q9UHW5 284 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 KCNE3Q9Y6H6 103 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 TMEM218A2RU14 115 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 UNC119BA6NIH7 251 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF879B4DU55 563 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 ACOT7O00154 380 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 EPPINO95925 133 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 IFNA4P05014 189 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 ACAA1P09110 424 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-201ENST00000352993 LIPCP11150 499 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 FPR3P25089 353 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 TEAD1P28347 426 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 GJA5P36382 358 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms