RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 BLKP51451 505 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 CLDN20P56880 219 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 NRG3P56975 720 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 SRSF5Q13243 272 aaKnown RBP20.34■□□□□ 0.85
UPF3A-201ENST00000351487 TATDN3Q17R31 274 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 SSX6Q7RTT6 188 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 CEACAM19Q7Z692 300 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 CADM2Q8N3J6 435 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 MS4A15Q8N5U1 240 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 OR5J2Q8NH18 312 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 SPACA7Q96KW9 195 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 GDF15Q99988 308 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 MKKSQ9NPJ1 570 aaPredicted RBP20.34■□□□□ 0.85
UPF3A-201ENST00000351487 ENAMQ9NRM1 1142 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 WDR70Q9NW82 654 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 RPS6KB2Q9UBS0 482 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 ST6GALNAC2Q9UJ37 374 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 KLHL21Q9UJP4 597 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 ICAM5Q9UMF0 924 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 A0A0G2JMP0 313 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 A0A0X1KG70 313 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 SLC9B1P1A6NJY1 282 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 PARGQ86W56 976 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 POMGNT2Q8NAT1 580 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 SMRP1Q8NCR6 262 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 OR4M2Q8NGB6 313 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 OR52E2Q8NGJ4 325 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 RNF170Q96K19 258 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 PRTFDC1Q9NRG1 225 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 CEP290O15078 2479 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 SZT2Q5T011 3432 aa20.34■□□□□ 0.85
UPF3A-201ENST00000351487 FAM240BA0A1B0GVZ2 78 aa20.33■□□□□ 0.85
UPF3A-201ENST00000351487 CT45A8P0DMV1 189 aa20.33■□□□□ 0.85
UPF3A-201ENST00000351487 CT45A9P0DMV2 189 aa20.33■□□□□ 0.85
UPF3A-201ENST00000351487 HIST1H1CP16403 213 aaKnown RBP20.33■□□□□ 0.85
UPF3A-201ENST00000351487 ALAS2P22557 587 aa20.33■□□□□ 0.85
UPF3A-201ENST00000351487 PYCR1P32322 319 aa20.33■□□□□ 0.85
UPF3A-201ENST00000351487 CT45A2Q5DJT8 189 aa20.33■□□□□ 0.85
UPF3A-201ENST00000351487 RPTNQ6XPR3 784 aa20.33■□□□□ 0.85
UPF3A-201ENST00000351487 SYS1Q8N2H4 156 aa20.33■□□□□ 0.85
UPF3A-201ENST00000351487 SMAP2Q8WU79 429 aaPredicted RBP20.33■□□□□ 0.85
UPF3A-201ENST00000351487 SGTBQ96EQ0 304 aa20.33■□□□□ 0.85
UPF3A-201ENST00000351487 DMRTB1Q96MA1 342 aa20.33■□□□□ 0.85
UPF3A-201ENST00000351487 ZNF578Q96N58 590 aaPredicted RBP20.33■□□□□ 0.85
UPF3A-201ENST00000351487 DGAT2Q96PD7 388 aa20.33■□□□□ 0.85
UPF3A-201ENST00000351487 MARVELD1Q9BSK0 173 aa20.33■□□□□ 0.85
UPF3A-201ENST00000351487 LRRC61Q9BV99 259 aa20.33■□□□□ 0.85
UPF3A-201ENST00000351487 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.33■□□□□ 0.85
UPF3A-201ENST00000351487 RANGRFQ9HD47 186 aaPredicted RBP20.33■□□□□ 0.85
UPF3A-201ENST00000351487 CYP8B1Q9UNU6 501 aa20.33■□□□□ 0.85
UPF3A-201ENST00000351487 RASD1Q9Y272 281 aa20.33■□□□□ 0.85
UPF3A-201ENST00000351487 HEATR5AQ86XA9 2040 aa20.33■□□□□ 0.85
UPF3A-201ENST00000351487 A0A087WUJ7 227 aa20.33■□□□□ 0.84
UPF3A-201ENST00000351487 B4DGG1 531 aa20.33■□□□□ 0.84
UPF3A-201ENST00000351487 NSA2O95478 260 aaKnown RBP20.33■□□□□ 0.84
UPF3A-201ENST00000351487 TFP02787 698 aa20.33■□□□□ 0.84
UPF3A-201ENST00000351487 NPR2P20594 1047 aa20.33■□□□□ 0.84
UPF3A-201ENST00000351487 TALDO1P37837 337 aa20.33■□□□□ 0.84
UPF3A-201ENST00000351487 INPP1P49441 399 aa20.33■□□□□ 0.84
UPF3A-201ENST00000351487 OR10A3P58181 314 aa20.33■□□□□ 0.84
UPF3A-201ENST00000351487 ACTA2P62736 377 aa20.33■□□□□ 0.84
UPF3A-201ENST00000351487 ACTG2P63267 376 aa20.33■□□□□ 0.84
UPF3A-201ENST00000351487 MRPS15P82914 257 aaKnown RBP20.33■□□□□ 0.84
UPF3A-201ENST00000351487 FUT7Q11130 342 aa20.33■□□□□ 0.84
UPF3A-201ENST00000351487 ZNF267Q14586 743 aaPredicted RBP20.33■□□□□ 0.84
UPF3A-201ENST00000351487 COL13A1Q5TAT6 717 aaPredicted RBP20.33■□□□□ 0.84
UPF3A-201ENST00000351487 SDR9C7Q8NEX9 313 aa20.33■□□□□ 0.84
UPF3A-201ENST00000351487 UBASH3BQ8TF42 649 aa20.33■□□□□ 0.84
UPF3A-201ENST00000351487 UPRTQ96BW1 309 aa20.33■□□□□ 0.84
UPF3A-201ENST00000351487 CLDN4O14493 209 aa20.32■□□□□ 0.84
UPF3A-201ENST00000351487 ZNF749O43361 778 aa20.32■□□□□ 0.84
UPF3A-201ENST00000351487 CDC123O75794 336 aaPredicted RBP20.32■□□□□ 0.84
UPF3A-201ENST00000351487 EIF4EP06730 217 aaKnown RBP20.32■□□□□ 0.84
UPF3A-201ENST00000351487 OR2T7P0C7T2 308 aa20.32■□□□□ 0.84
UPF3A-201ENST00000351487 ACSM3Q53FZ2 586 aa20.32■□□□□ 0.84
UPF3A-201ENST00000351487 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.32■□□□□ 0.84
UPF3A-201ENST00000351487 RFLNBQ8N5W9 214 aa20.32■□□□□ 0.84
UPF3A-201ENST00000351487 OR4M1Q8NGD0 313 aa20.32■□□□□ 0.84
UPF3A-201ENST00000351487 OR6C4Q8NGE1 309 aa20.32■□□□□ 0.84
UPF3A-201ENST00000351487 OR2T27Q8NH04 317 aa20.32■□□□□ 0.84
UPF3A-201ENST00000351487 OR4K13Q8NH42 304 aa20.32■□□□□ 0.84
UPF3A-201ENST00000351487 GHSRQ92847 366 aa20.32■□□□□ 0.84
UPF3A-201ENST00000351487 TRIM63Q969Q1 353 aa20.32■□□□□ 0.84
UPF3A-201ENST00000351487 CNN2Q99439 309 aaKnown RBP20.32■□□□□ 0.84
UPF3A-201ENST00000351487 NLKQ9UBE8 527 aa20.32■□□□□ 0.84
UPF3A-201ENST00000351487 BRWD1Q9NSI6 2320 aa20.32■□□□□ 0.84
UPF3A-201ENST00000351487 SERINC4A6NH21 518 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 TTC36A6NLP5 189 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 MCIDASD6RGH6 385 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 OGG1O15527 345 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 SLC43A1O75387 559 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 NUDT1P36639 197 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 ACVR1BP36896 505 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 CDK10Q15131 360 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 GLCCI1Q86VQ1 547 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 SLC7A5P1Q8MH63 180 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 SAMD12Q8N8I0 201 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 FAM98AQ8NCA5 519 aaKnown RBP20.31■□□□□ 0.84
UPF3A-201ENST00000351487 C16orf52Q8NHV5 167 aa20.31■□□□□ 0.84
UPF3A-201ENST00000351487 ZMYND19Q96E35 227 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms