RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 KDM4EB2RXH2 506 aaPredicted RBP21.58■■□□□ 1.05
NPAS3-201ENST00000346562 ZNF264O43296 627 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 MTHFD2P13995 350 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 NKX6-1P78426 367 aaPredicted RBP21.58■■□□□ 1.05
NPAS3-201ENST00000346562 FAM78AQ5JUQ0 283 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 UBE2NLQ5JXB2 153 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 C9orf135Q5VTT2 229 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 SLC41A2Q96JW4 573 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 NKX3-1Q99801 234 aaPredicted RBP21.58■■□□□ 1.05
NPAS3-201ENST00000346562 ACSS1Q9NUB1 689 aaPredicted RBP21.58■■□□□ 1.05
NPAS3-201ENST00000346562 A0A0U1RQS6 177 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 SULT1C2O00338 296 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 OLFM2O95897 454 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 TK1P04183 234 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 PODNL1Q6PEZ8 512 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 SGK3Q96BR1 496 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 GLTPQ9NZD2 209 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 PCDHGA1Q9Y5H4 931 aa21.58■■□□□ 1.05
NPAS3-201ENST00000346562 ARNTLO00327 626 aa21.58■■□□□ 1.04
NPAS3-201ENST00000346562 SIX1Q15475 284 aaPredicted RBP21.58■■□□□ 1.04
NPAS3-201ENST00000346562 BEST4Q8NFU0 473 aa21.58■■□□□ 1.04
NPAS3-201ENST00000346562 OR6F1Q8NGZ6 308 aa21.58■■□□□ 1.04
NPAS3-201ENST00000346562 ZNF480Q8WV37 535 aa21.58■■□□□ 1.04
NPAS3-201ENST00000346562 DEDD2Q8WXF8 326 aa21.58■■□□□ 1.04
NPAS3-201ENST00000346562 ITFG2Q969R8 447 aa21.58■■□□□ 1.04
NPAS3-201ENST00000346562 GORASP2Q9H8Y8 452 aa21.58■■□□□ 1.04
NPAS3-201ENST00000346562 ELOVL3Q9HB03 270 aa21.58■■□□□ 1.04
NPAS3-201ENST00000346562 NKX6-3A6NJ46 265 aa21.58■■□□□ 1.04
NPAS3-201ENST00000346562 CLDN17P56750 224 aa21.58■■□□□ 1.04
NPAS3-201ENST00000346562 FBXW12Q6X9E4 464 aa21.58■■□□□ 1.04
NPAS3-201ENST00000346562 INSM2Q96T92 566 aaPredicted RBP21.58■■□□□ 1.04
NPAS3-201ENST00000346562 TXN2Q99757 166 aa21.58■■□□□ 1.04
NPAS3-201ENST00000346562 OLAHQ9NV23 265 aa21.58■■□□□ 1.04
NPAS3-201ENST00000346562 MEIS3P1A6NDR6 274 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 GAPDHSO14556 408 aaPredicted RBP21.57■■□□□ 1.04
NPAS3-201ENST00000346562 CAPNS1P04632 268 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 SPOCK1Q08629 439 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 ACTBL2Q562R1 376 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 TMEM178AQ8NBL3 297 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 EDAQ92838 391 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 TOX2Q96NM4 488 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 NMNAT2Q9BZQ4 307 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 MED16Q9Y2X0 877 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 H0YGG7 62 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 ONECUT3O60422 494 aaPredicted RBP21.57■■□□□ 1.04
NPAS3-201ENST00000346562 GPX3P22352 226 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 CRHBPP24387 322 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 OR1D4P47884 311 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 CCNJQ5T5M9 372 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 VHLLQ6RSH7 139 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 ZNF767PQ75MW2 155 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 AAED1Q7RTV5 226 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 ADIPOR2Q86V24 386 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 OR2T35Q8NGX2 323 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 NUDT22Q9BRQ3 303 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 TREX1Q9NSU2 369 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 CNOT2Q9NZN8 540 aaKnown RBP21.57■■□□□ 1.04
NPAS3-201ENST00000346562 CDHR4A6H8M9 788 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 HOXA1P49639 335 aaPredicted RBP21.57■■□□□ 1.04
NPAS3-201ENST00000346562 IL13RA1P78552 427 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 FNDC8Q8TC99 324 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 OR6C1Q96RD1 312 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 CMSS1Q9BQ75 279 aaKnown RBP21.57■■□□□ 1.04
NPAS3-201ENST00000346562 CLMPQ9H6B4 373 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 RPS18P62269 152 aaKnown RBP21.57■■□□□ 1.04
NPAS3-201ENST00000346562 ERV3-1Q14264 604 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 SFRP5Q5T4F7 317 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 SIMC1Q8NDZ2 872 aa21.57■■□□□ 1.04
NPAS3-201ENST00000346562 ZNF578Q96N58 590 aaPredicted RBP21.57■■□□□ 1.04
NPAS3-201ENST00000346562 INTS6Q9UL03 887 aaKnown RBP21.57■■□□□ 1.04
NPAS3-201ENST00000346562 A0A1W2PPH5 198 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 HEXAP06865 529 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 CPT2P23786 658 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 HOXC5Q00444 222 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 CTSL3PQ5NE16 218 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 ZNF808Q8N4W9 903 aaPredicted RBP21.56■■□□□ 1.04
NPAS3-201ENST00000346562 DMBX1Q8NFW5 382 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 ZBTB8AQ96BR9 441 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 UBL7Q96S82 380 aaPredicted RBP21.56■■□□□ 1.04
NPAS3-201ENST00000346562 SLC30A3Q99726 388 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 ZNF334Q9HCZ1 680 aaPredicted RBP21.56■■□□□ 1.04
NPAS3-201ENST00000346562 DNMT3BQ9UBC3 853 aaKnown RBP21.56■■□□□ 1.04
NPAS3-201ENST00000346562 C17orf112F2Z3M2 114 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 WNT11O96014 354 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 CA5AP35218 305 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 SLC14A1Q13336 389 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 TMEM176BQ3YBM2 270 aaPredicted RBP21.56■■□□□ 1.04
NPAS3-201ENST00000346562 OR5M10Q6IEU7 315 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 BRICD5Q6PL45 260 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 NDUFAF7Q7L592 441 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 PIGQQ9BRB3 760 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 TOR1AO14656 332 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 AIFM1O95831 613 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 INHBCP55103 352 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 TAS2R30P59541 319 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 ANKRD19PQ9H560 264 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 EHFQ9NZC4 300 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 TRAPPC2LQ9UL33 140 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 NUMBLQ9Y6R0 609 aa21.56■■□□□ 1.04
NPAS3-201ENST00000346562 CLN5O75503 358 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms