RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 PDK3Q15120 406 aa14.46□□□□□ -0.09
RAB5C-201ENST00000346213 CTU2Q2VPK5 515 aaKnown RBP14.46□□□□□ -0.09
RAB5C-201ENST00000346213 DMRTC2Q8IXT2 367 aaPredicted RBP14.46□□□□□ -0.09
RAB5C-201ENST00000346213 PM20D2Q8IYS1 436 aa14.46□□□□□ -0.09
RAB5C-201ENST00000346213 CHDHQ8NE62 594 aaPredicted RBP14.46□□□□□ -0.09
RAB5C-201ENST00000346213 NEURL3Q96EH8 262 aa14.46□□□□□ -0.09
RAB5C-201ENST00000346213 ADGRG7Q96K78 797 aa14.46□□□□□ -0.09
RAB5C-201ENST00000346213 KCNJ16Q9NPI9 418 aa14.46□□□□□ -0.09
RAB5C-201ENST00000346213 MED17Q9NVC6 651 aa14.46□□□□□ -0.09
RAB5C-201ENST00000346213 H3BML4 177 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 SEC14L5O43304 696 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 NDUFB5O43674 189 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 ADAM11O75078 769 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 CST1P01037 141 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 LYNP07948 512 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 HOXD4P09016 255 aaPredicted RBP14.46□□□□□ -0.1
RAB5C-201ENST00000346213 OR12D1P0DN82 309 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 MATN1P21941 496 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 SLC6A8P48029 635 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 C6orf52Q5T4I8 152 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 HEPHL1Q6MZM0 1159 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 CCDC80Q76M96 950 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 RNF130Q86XS8 419 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 MIPOL1Q8TD10 442 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 ADAMTS15Q8TE58 950 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 SLC35G5Q96KT7 338 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 UCN2Q96RP3 112 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 UBQLN4Q9NRR5 601 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 ICAM5Q9UMF0 924 aa14.46□□□□□ -0.1
RAB5C-201ENST00000346213 CELSR1Q9NYQ6 3014 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 A0A1W2PQD3 144 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 CLDN24A6NM45 220 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 DLGAP1O14490 977 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 TNFSF13O75888 250 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 ZNF682O95780 498 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 SEMG1P04279 462 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 LINGO3P0C6S8 592 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 ARAFP10398 606 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 ZNF23P17027 643 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 PSMD4P55036 377 aaKnown RBP14.45□□□□□ -0.1
RAB5C-201ENST00000346213 TXNL4AP83876 142 aaKnown RBP14.45□□□□□ -0.1
RAB5C-201ENST00000346213 C17orf67Q0P5P2 114 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 PDZK1Q5T2W1 519 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 UGT2A3Q6UWM9 527 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 SLC30A8Q8IWU4 369 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 SMPDL3BQ92485 455 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 MAL2Q969L2 176 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 ZNF350Q9GZX5 532 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 QRSL1Q9H0R6 528 aaKnown RBP14.45□□□□□ -0.1
RAB5C-201ENST00000346213 TMEM185BQ9H7F4 350 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 CALHM2Q9HA72 323 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 IL1RAPQ9NPH3 570 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 JKAMPQ9P055 326 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 MRTO4Q9UKD2 239 aaKnown RBP14.45□□□□□ -0.1
RAB5C-201ENST00000346213 MKLN1Q9UL63 735 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 CARD8Q9Y2G2 431 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 DOCK7Q96N67 2140 aa14.45□□□□□ -0.1
RAB5C-201ENST00000346213 HMGN4O00479 90 aa14.44□□□□□ -0.1
RAB5C-201ENST00000346213 GCM2O75603 506 aaPredicted RBP14.44□□□□□ -0.1
RAB5C-201ENST00000346213 UGT2B17O75795 530 aa14.44□□□□□ -0.1
RAB5C-201ENST00000346213 AQP8O94778 261 aa14.44□□□□□ -0.1
RAB5C-201ENST00000346213 UBTFL6P0CB48 400 aaPredicted RBP14.44□□□□□ -0.1
RAB5C-201ENST00000346213 POU3F2P20265 443 aaPredicted RBP14.44□□□□□ -0.1
RAB5C-201ENST00000346213 DSTNP60981 165 aa14.44□□□□□ -0.1
RAB5C-201ENST00000346213 FOXF1Q12946 379 aa14.44□□□□□ -0.1
RAB5C-201ENST00000346213 SCARB2Q14108 478 aa14.44□□□□□ -0.1
RAB5C-201ENST00000346213 FLYWCH1Q4VC44 716 aa14.44□□□□□ -0.1
RAB5C-201ENST00000346213 ZDHHC21Q8IVQ6 265 aa14.44□□□□□ -0.1
RAB5C-201ENST00000346213 SVOPLQ8N434 492 aa14.44□□□□□ -0.1
RAB5C-201ENST00000346213 INTS12Q96CB8 462 aaKnown RBP14.44□□□□□ -0.1
RAB5C-201ENST00000346213 RUBCNLQ9H714 662 aa14.44□□□□□ -0.1
RAB5C-201ENST00000346213 ADPRHL2Q9NX46 363 aa14.44□□□□□ -0.1
RAB5C-201ENST00000346213 HSPB2A8KAH6 182 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 EI24O14681 340 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 NID1P14543 1247 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 KLK2P20151 261 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 MAGEA8P43361 318 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 CHN2P52757 468 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 CRYBA2P53672 197 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 ATP12AP54707 1039 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 CDK6Q00534 326 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 GANABQ14697 944 aaKnown RBP14.43□□□□□ -0.1
RAB5C-201ENST00000346213 HSPB2Q16082 182 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 TYW3Q6IPR3 259 aaKnown RBP14.43□□□□□ -0.1
RAB5C-201ENST00000346213 TMEM154Q6P9G4 183 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 VWA1Q6PCB0 445 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 FRRS1Q6ZNA5 592 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 PIWIL3Q7Z3Z3 882 aaKnown RBP14.43□□□□□ -0.1
RAB5C-201ENST00000346213 GTPBP8Q8N3Z3 284 aaPredicted RBP14.43□□□□□ -0.1
RAB5C-201ENST00000346213 FNDC9Q8TBE3 224 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 NRGNQ92686 78 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 MOAP1Q96BY2 351 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 LURAP1Q96LR2 239 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 RSPO3Q9BXY4 272 aaPredicted RBP14.43□□□□□ -0.1
RAB5C-201ENST00000346213 SDHAF3Q9NRP4 125 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 UBAP1Q9NZ09 502 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 SCOCQ9UIL1 159 aa14.43□□□□□ -0.1
RAB5C-201ENST00000346213 INTS1Q8N201 2190 aaKnown RBP14.43□□□□□ -0.1
RAB5C-201ENST00000346213 GNGT2O14610 69 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms