RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 FOXD4Q12950 439 aaPredicted RBP12.83□□□□□ -0.36
HMGN3-202ENST00000344726 RGNQ15493 299 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 PAGE3Q5JUK9 113 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 GTF2IRD2BQ6EKJ0 949 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 TFAP2EQ6VUC0 442 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 ZNF836Q6ZNA1 936 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 TMPPEQ6ZT21 453 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 GRINAQ7Z429 371 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 GTF2IRD2Q86UP8 949 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 C10orf111Q8N326 155 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 PMM1Q92871 262 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 TMEM19Q96HH6 336 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 ARL5BQ96KC2 179 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 MAGEB18Q96M61 343 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 OR11A1Q9GZK7 315 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 SERINC1Q9NRX5 453 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 CCDC167Q9P0B6 97 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 CHRNA9Q9UGM1 479 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 UQCRHLA0A096LP55 91 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 A0A096LPI6 279 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 CDHR4A6H8M9 788 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 CLIC1O00299 241 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 NR5A2O00482 541 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 CYTIPO60759 359 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 GCM2O75603 506 aaPredicted RBP12.82□□□□□ -0.36
HMGN3-202ENST00000344726 FESP07332 822 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 YES1P07947 543 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 CD99P14209 185 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 CRISP3P54108 245 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 EPS8Q12929 822 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 KEAP1Q14145 624 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 TMEM201Q5SNT2 666 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 LRIF1Q5T3J3 769 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 BEND4Q6ZU67 534 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 CXorf67Q86X51 503 aaPredicted RBP12.82□□□□□ -0.36
HMGN3-202ENST00000344726 PEX5LQ8IYB4 626 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 WFDC11Q8NEX6 87 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 OR52P1PQ8NH57 321 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 SLC25A43Q8WUT9 341 aaPredicted RBP12.82□□□□□ -0.36
HMGN3-202ENST00000344726 MAL2Q969L2 176 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 ZNF775Q96BV0 537 aaPredicted RBP12.82□□□□□ -0.36
HMGN3-202ENST00000344726 SPDL1Q96EA4 605 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 PIK3IP1Q96FE7 263 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 ZNF300Q96RE9 604 aaPredicted RBP12.82□□□□□ -0.36
HMGN3-202ENST00000344726 RSPO3Q9BXY4 272 aaPredicted RBP12.82□□□□□ -0.36
HMGN3-202ENST00000344726 BCO1Q9HAY6 547 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 GP6Q9HCN6 339 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 DLL4Q9NR61 685 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 OSGIN1Q9UJX0 560 aa12.82□□□□□ -0.36
HMGN3-202ENST00000344726 TRBV5-3A0A0A0MS03 114 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 TMEM72A0PK05 275 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 ZNF814B7Z6K7 855 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 SULT2B1O00204 365 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 FAAHO00519 579 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 GKN3PP0CG01 181 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 TFPIP10646 304 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 BMP2P12643 396 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 CCNA2P20248 432 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 ACAA2P42765 397 aaKnown RBP12.81□□□□□ -0.36
HMGN3-202ENST00000344726 ATP4BP51164 291 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 RIPPLY3P57055 190 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 RASGEF1BQ0VAM2 473 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 TSC22D1Q15714 1073 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 AGKQ53H12 422 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 GABRG1Q8N1C3 465 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 SLC43A2Q8N370 569 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 CLIP4Q8N3C7 705 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 IKZF5Q9H5V7 419 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 ZNF385DQ9H6B1 395 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 ZNF446Q9NWS9 450 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 ZNF226Q9NYT6 803 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 CALML5Q9NZT1 146 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 VAPAQ9P0L0 249 aa12.81□□□□□ -0.36
HMGN3-202ENST00000344726 ZNF443Q9Y2A4 671 aaPredicted RBP12.81□□□□□ -0.36
HMGN3-202ENST00000344726 TMED7-TICAM2A0A0A6YYA0 188 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 A0A0G2JPF8 293 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 ZC3H12DA2A288 527 aaKnown RBP12.8□□□□□ -0.36
HMGN3-202ENST00000344726 CFAP73A6NFT4 308 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 HNRNPCL2B2RXH8 293 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 HNRNPCL3B7ZW38 293 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 KLF4O43474 513 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 HNRNPCL1O60812 293 aaKnown RBP12.8□□□□□ -0.36
HMGN3-202ENST00000344726 EDF1O60869 148 aaKnown RBP12.8□□□□□ -0.36
HMGN3-202ENST00000344726 RAMP1O60894 148 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 PMS2P2O95744 297 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 HNRNPCL4P0DMR1 293 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 PRG2P13727 222 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 PSMB1P20618 241 aaKnown RBP12.8□□□□□ -0.36
HMGN3-202ENST00000344726 TACR3P29371 465 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 HOXC12P31275 282 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 SLC1A3P43003 542 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 CSNK2A1P68400 391 aaPredicted RBP12.8□□□□□ -0.36
HMGN3-202ENST00000344726 FADDQ13158 208 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 GNA13Q14344 377 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 SQLEQ14534 574 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 LIN52Q52LA3 116 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 RNF220Q5VTB9 566 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 ABLIM2Q6H8Q1 611 aa12.8□□□□□ -0.36
HMGN3-202ENST00000344726 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.8□□□□□ -0.36
HMGN3-202ENST00000344726 STK32CQ86UX6 486 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms