RNA–Protein interactions for RNA: ENST00000343742.6

LRRK2-202, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5 BASIC

Gene LRRK2, Length 4,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-202ENST00000343742 PCDHGB6Q9Y5F9 930 aa11.52□□□□□ -0.56
LRRK2-202ENST00000343742 CACNA1HO95180 2353 aa11.52□□□□□ -0.56
LRRK2-202ENST00000343742 SIGLEC6O43699 453 aa11.52□□□□□ -0.56
LRRK2-202ENST00000343742 TGM4P49221 684 aa11.52□□□□□ -0.56
LRRK2-202ENST00000343742 NKX2-5P52952 324 aaPredicted RBP11.52□□□□□ -0.56
LRRK2-202ENST00000343742 DNM1P34Q6PK57 102 aa11.52□□□□□ -0.56
LRRK2-202ENST00000343742 SLC35F2Q8IXU6 374 aa11.52□□□□□ -0.56
LRRK2-202ENST00000343742 OR8S1Q8NH09 359 aa11.52□□□□□ -0.56
LRRK2-202ENST00000343742 OR4C3Q8NH37 302 aa11.52□□□□□ -0.56
LRRK2-202ENST00000343742 SLC22A8Q8TCC7 542 aa11.52□□□□□ -0.56
LRRK2-202ENST00000343742 STRADBQ9C0K7 418 aa11.52□□□□□ -0.56
LRRK2-202ENST00000343742 SP140LQ9H930 580 aa11.52□□□□□ -0.56
LRRK2-202ENST00000343742 SLC39A1Q9NY26 324 aa11.52□□□□□ -0.56
LRRK2-202ENST00000343742 ARHGEF17Q96PE2 2063 aaPredicted RBP11.52□□□□□ -0.57
LRRK2-202ENST00000343742 ZNF701M0R085 212 aaPredicted RBP11.52□□□□□ -0.57
LRRK2-202ENST00000343742 EMDP50402 254 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 TAS2R43P59537 309 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 ACTC1P68032 377 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 ACTA1P68133 377 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 ARHGAP11BQ3KRB8 267 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 NKAIN1Q4KMZ8 207 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 WBP2NLQ6ICG8 309 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 STT3BQ8TCJ2 826 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 GPN2Q9H9Y4 310 aaPredicted RBP11.52□□□□□ -0.57
LRRK2-202ENST00000343742 HINT3Q9NQE9 182 aaKnown RBP11.52□□□□□ -0.57
LRRK2-202ENST00000343742 MED11Q9P086 117 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 A4GNTQ9UNA3 340 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 WBP4O75554 376 aaKnown RBP11.52□□□□□ -0.57
LRRK2-202ENST00000343742 ETV5P41161 510 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 LSSP48449 732 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 ETV1P50549 477 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 ZNF425Q6IV72 752 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 GPBAR1Q8TDU6 330 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 NAT6Q93015 286 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 TSSK2Q96PF2 358 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 MED28Q9H204 178 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 ING3Q9NXR8 418 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 THSD7BQ9C0I4 1608 aa11.52□□□□□ -0.57
LRRK2-202ENST00000343742 TMEM72A0PK05 275 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 IDSB3KWA1 339 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 PDCD5O14737 125 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 PLATP00750 562 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 OR8G3PP0DMU2 310 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 PNMTP11086 282 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 BMP4P12644 408 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 ZNF20P17024 532 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 PTPN6P29350 595 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 HSD17B7P56937 341 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 PRPS1P60891 318 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 RPS15P62841 145 aaKnown RBP11.51□□□□□ -0.57
LRRK2-202ENST00000343742 MAPK14Q16539 360 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 ACSM3Q53FZ2 586 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 SYT6Q5T7P8 510 aaPredicted RBP11.51□□□□□ -0.57
LRRK2-202ENST00000343742 SLC46A3Q7Z3Q1 461 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 OR4D11Q8NGI4 311 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 PDCD10Q9BUL8 212 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 SACM1LQ9NTJ5 587 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 HPF1Q9NWY4 346 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 BABAM2Q9NXR7 383 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 COLQQ9Y215 455 aaPredicted RBP11.51□□□□□ -0.57
LRRK2-202ENST00000343742 A0A1B0GX78 115 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 ZAR1LA6NP61 321 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 RGS9O75916 674 aaPredicted RBP11.51□□□□□ -0.57
LRRK2-202ENST00000343742 NSA2O95478 260 aaKnown RBP11.51□□□□□ -0.57
LRRK2-202ENST00000343742 H2BFMP0C1H6 154 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 CLUP10909 449 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 GLULP15104 373 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 BCAP31P51572 246 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 DCDP81605 110 aaKnown RBP11.51□□□□□ -0.57
LRRK2-202ENST00000343742 POU3F1Q03052 451 aaPredicted RBP11.51□□□□□ -0.57
LRRK2-202ENST00000343742 BCORP1Q8N888 145 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 SLC2A12Q8TD20 617 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.51□□□□□ -0.57
LRRK2-202ENST00000343742 PRDM9Q9NQV7 894 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 C2orf42Q9NWW7 574 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 ABI3Q9P2A4 366 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 CTSFQ9UBX1 484 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 HRKO00198 91 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 PIAS2O75928 621 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 IFNA6P05013 189 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 IGHV4-34P06331 123 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 NME1P15531 152 aaKnown RBP11.51□□□□□ -0.57
LRRK2-202ENST00000343742 TNFSF8P32971 234 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 AQP6Q13520 282 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 MELKQ14680 651 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 ZNF283Q8N7M2 679 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 AGBL5Q8NDL9 886 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 CDX2Q99626 313 aaPredicted RBP11.51□□□□□ -0.57
LRRK2-202ENST00000343742 SYT4Q9H2B2 425 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 DOCK4Q8N1I0 1966 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 S1PR1P21453 382 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 ZIC1Q15915 447 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 FAM180AQ6UWF9 173 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 PAMR1Q6UXH9 720 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 NLKQ9UBE8 527 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 SLC6A5Q9Y345 797 aa11.51□□□□□ -0.57
LRRK2-202ENST00000343742 UBE2QL1A1L167 161 aa11.5□□□□□ -0.57
LRRK2-202ENST00000343742 ORC5O43913 435 aa11.5□□□□□ -0.57
LRRK2-202ENST00000343742 HPGDSO60760 199 aa11.5□□□□□ -0.57
LRRK2-202ENST00000343742 POU2F2P09086 479 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms