RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 LYPD3O95274 346 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 CSTAP01040 98 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 MT-ND2P03891 347 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 FBXO45P0C2W1 286 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 CD36P16671 472 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 NAGAP17050 411 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 SPINK2P20155 84 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 ELAVL4P26378 380 aaKnown RBP13.43□□□□□ -0.26
CXCL12-201ENST00000343575 CASP3P42574 277 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 DAPP51397 102 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 CHAF1BQ13112 559 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 SKP2Q13309 424 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 DGCR6Q14129 220 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 SF3B4Q15427 424 aaKnown RBP eCLIP13.43□□□□□ -0.26
CXCL12-201ENST00000343575 COLEC12Q5KU26 742 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 ATP1A1-AS1Q5TC04 95 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 KDM4DQ6B0I6 523 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 ZNF770Q6IQ21 691 aaPredicted RBP13.43□□□□□ -0.26
CXCL12-201ENST00000343575 H3F3CQ6NXT2 135 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 TAGAPQ8N103 731 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 OR5M3Q8NGP4 307 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 CNIH3Q8TBE1 160 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 CACYBPQ9HB71 228 aaKnown RBP13.43□□□□□ -0.26
CXCL12-201ENST00000343575 ABCB10Q9NRK6 738 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 PDP1Q9P0J1 537 aaPredicted RBP13.43□□□□□ -0.26
CXCL12-201ENST00000343575 NDRG4Q9ULP0 352 aaKnown RBP13.43□□□□□ -0.26
CXCL12-201ENST00000343575 A0A1W2PQD3 144 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 LOC110117498-PIK3R3F6TDL0 507 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 H1F0P07305 194 aaKnown RBP13.42□□□□□ -0.26
CXCL12-201ENST00000343575 EVI2BP34910 448 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 KRT20P35900 424 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 ETV6P41212 452 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 SOX3P41225 446 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 MASP1P48740 699 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 MLF1P58340 268 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 NCS1P62166 190 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 MAD2L1BPQ15013 274 aaPredicted RBP13.42□□□□□ -0.26
CXCL12-201ENST00000343575 ZNF791Q3KP31 576 aaPredicted RBP13.42□□□□□ -0.26
CXCL12-201ENST00000343575 ZNF544Q6NX49 715 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 FAHD1Q6P587 224 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 ZNF527Q8NB42 609 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 SIGLEC11Q96RL6 698 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 CDCP1Q9H5V8 836 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 NEK6Q9HC98 313 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 SCDO00767 359 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 AP3D1O14617 1153 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 SERPINA7P05543 415 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 ICAM2P13598 275 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 TGFBR2P37173 567 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 MAP2K4P45985 399 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 TEKQ02763 1124 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 OR1Q1Q15612 314 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 NTRK2Q16620 822 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 MICAQ29983 383 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 STEAP3Q658P3 488 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 B3GNTL1Q67FW5 361 aaPredicted RBP13.42□□□□□ -0.26
CXCL12-201ENST00000343575 BICRALQ6AI39 1079 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 RPS19BP1Q86WX3 136 aaKnown RBP13.42□□□□□ -0.26
CXCL12-201ENST00000343575 RAB43Q86YS6 212 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 SLC5A8Q8N695 610 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 OR9Q2Q8NGE9 314 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 PHOSPHO1Q8TCT1 267 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 CAPSLQ8WWF8 208 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 PITX2Q99697 317 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 PRSS27Q9BQR3 290 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 NDEL1Q9GZM8 345 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 SIAEQ9HAT2 523 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 PLCXD1Q9NUJ7 323 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 SLC35A3Q9Y2D2 325 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 GRIP1Q9Y3R0 1128 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 HRH3Q9Y5N1 445 aa13.42□□□□□ -0.26
CXCL12-201ENST00000343575 ZFHX4Q86UP3 3567 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 AIREO43918 545 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 FMO6PO60774 539 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 MITFO75030 526 aaPredicted RBP13.41□□□□□ -0.26
CXCL12-201ENST00000343575 CYP7B1O75881 506 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 FMO3P31513 532 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 PTGDSP41222 190 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 GAS1P54826 345 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 LSM3P62310 102 aaKnown RBP13.41□□□□□ -0.26
CXCL12-201ENST00000343575 IFITM2Q01629 132 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 FOXC1Q12948 553 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 CLN3Q13286 438 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 TBCEQ15813 527 aaPredicted RBP13.41□□□□□ -0.26
CXCL12-201ENST00000343575 DCAF10Q5QP82 559 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 ZNF468Q5VIY5 522 aaPredicted RBP13.41□□□□□ -0.26
CXCL12-201ENST00000343575 AGAP6Q5VW22 663 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 PODNL1Q6PEZ8 512 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 WDR88Q6ZMY6 472 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 CCDC81Q6ZN84 652 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 GDF7Q7Z4P5 450 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 NKAIN4Q8IVV8 208 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 OR10G3Q8NGC4 313 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 BRIX1Q8TDN6 353 aaKnown RBP13.41□□□□□ -0.26
CXCL12-201ENST00000343575 MYDGFQ969H8 173 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 SPACA9Q96E40 222 aaPredicted RBP13.41□□□□□ -0.26
CXCL12-201ENST00000343575 AGAP4Q96P64 663 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 FEVQ99581 238 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 CCDC32Q9BV29 185 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 FNDC11Q9BVV2 318 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms