RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 FCRLBQ6BAA4 426 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 UNQ6126/PRO20091Q6UXV3 157 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 CHRDL2Q6WN34 429 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 ZMYND19Q96E35 227 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-203ENST00000343508 ST6GAL2Q96JF0 529 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 OR5B12Q96R08 314 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 GPR62Q9BZJ7 368 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 POFUT1Q9H488 388 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 DSCR3O14972 297 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 BET1O15155 118 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 SNRPBP14678 240 aaKnown RBP4.47□□□□□ -1.69
CSMD3-203ENST00000343508 CLRN1P58418 232 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 FIGNL1Q6PIW4 674 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 DPPA4Q7L190 304 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 NDUFAF7Q7L592 441 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 OR5H2Q8NGV7 314 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 PNPLA2Q96AD5 504 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 MICU1Q9BPX6 476 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 CNTNAP3Q9BZ76 1288 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 KCNJ16Q9NPI9 418 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 FAM212BQ9NTI7 297 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-203ENST00000343508 OR1A2Q9Y585 309 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 GRXCR1A8MXD5 290 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 TMEM150CB9EJG8 249 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 GFYI3L273 518 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 OR8U9P0C7N5 309 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 ZDHHC11BP0C7U3 371 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 SYN1P17600 705 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 CRABP1P29762 137 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 HOXA9P31269 272 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 C17orf107Q6ZR85 190 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 OTOP2Q7RTS6 562 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 DGLUCYQ7Z3D6 616 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 BCDIN3DQ7Z5W3 292 aaKnown RBP4.47□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF565Q8N9K5 539 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 BOLLQ8N9W6 283 aaKnown RBP4.47□□□□□ -1.69
CSMD3-203ENST00000343508 OR6T1Q8NGN1 323 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 TMEM106CQ9BVX2 250 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 SMCO4Q9NRQ5 59 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 STEAP1Q9UHE8 339 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 TSPAN11A1L157 253 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 C11orf98E9PRG8 122 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 C6P13671 934 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 SRP9P49458 86 aaKnown RBP4.46□□□□□ -1.69
CSMD3-203ENST00000343508 FABP5Q01469 135 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 SYPL1Q16563 259 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 CCNJQ5T5M9 372 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 AWAT2Q6E213 333 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 STEAP1BQ6NZ63 245 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 RASGRP3Q8IV61 690 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 PLPP6Q8IY26 295 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 OR5AR1Q8NGP9 310 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 BRI3BPQ8WY22 251 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 SLC25A19Q9HC21 320 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 A0A0G2JMZ2 1700 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 LRRC37A2A6NM11 1700 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 SLC31A1O15431 190 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 SPI1P17947 270 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 GPLD1P80108 840 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 DCST2Q5T1A1 773 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 SLCO4C1Q6ZQN7 724 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 HIST2H3AQ71DI3 136 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 CMTM3Q96MX0 182 aa4.46□□□□□ -1.69
CSMD3-203ENST00000343508 ANTXRLA6NF34 631 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF865P0CJ78 1059 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-203ENST00000343508 MGMTP16455 207 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 TLE2Q04725 743 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 ERN2Q76MJ5 926 aaKnown RBP4.46□□□□□ -1.7
CSMD3-203ENST00000343508 REM2Q8IYK8 340 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-203ENST00000343508 CYB561A3Q8NBI2 242 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 IGSF21Q96ID5 467 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 RHNO1Q9BSD3 238 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 PNO1Q9NRX1 252 aaKnown RBP4.46□□□□□ -1.7
CSMD3-203ENST00000343508 HMGN4O00479 90 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 IFNA1P01562 189 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 HRGP04196 525 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 NPPBP16860 134 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 CBLP22681 906 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 CD70P32970 193 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 RGRP47804 291 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 MRPL2Q5T653 305 aaKnown RBP4.46□□□□□ -1.7
CSMD3-203ENST00000343508 OR10K2Q6IF99 312 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 DDOQ99489 341 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 CXorf36Q9H7Y0 433 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 SEC61A2Q9H9S3 476 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 C1orf123Q9NWV4 160 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 IGLV3-27P01718 113 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 C1SP09871 688 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 RRASP10301 218 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 GP1BBP13224 206 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 CHATP28329 748 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 BEX5Q5H9J7 111 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 HEPHL1Q6MZM0 1159 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 TCTN3Q6NUS6 607 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 MTFR2Q6P444 385 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 HMGN2P46Q86SG4 172 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 LSMEM1Q8N8F7 131 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 OR2L8Q8NGY9 312 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 CHAC2Q8WUX2 184 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 APH1BQ8WW43 257 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms