RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 KEAP1Q14145 624 aa13.99□□□□□ -0.17
UBE3B-202ENST00000342494 PGGHGQ32M88 737 aa13.99□□□□□ -0.17
UBE3B-202ENST00000342494 TMEM52BQ4KMG9 183 aa13.99□□□□□ -0.17
UBE3B-202ENST00000342494 NLKQ9UBE8 527 aa13.99□□□□□ -0.17
UBE3B-202ENST00000342494 GOSR2O14653 212 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 MSR1P21757 451 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 ENPP1P22413 925 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 GPLD1P80108 840 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 ASB16Q96NS5 453 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 GCM1Q9NP62 436 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 SERINC4A6NH21 518 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 ZNF749O43361 778 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 SPOCK1Q08629 439 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 DUSP6Q16828 381 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 STEAP2Q8NFT2 490 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 SLC19A3Q9BZV2 496 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 NME7Q9Y5B8 376 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 PCDHGA1Q9Y5H4 931 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 FAM183AA6NL82 134 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 TMEM64Q6YI46 380 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 MEPCEQ7L2J0 689 aaKnown RBP13.98□□□□□ -0.17
UBE3B-202ENST00000342494 CCDC32Q9BV29 185 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 DECR2Q9NUI1 292 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 ANKRD10Q9NXR5 420 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 ITGB2P05107 769 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 CSF1P09603 554 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 EIF2DP41214 584 aaKnown RBP13.98□□□□□ -0.17
UBE3B-202ENST00000342494 GARNL3Q5VVW2 1013 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 COMTD1Q86VU5 262 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 WDSUB1Q8N9V3 476 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 RNF128Q8TEB7 428 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 ZNF578Q96N58 590 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-202ENST00000342494 SLC46A1Q96NT5 459 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 SLC30A3Q99726 388 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 EGLN3Q9H6Z9 239 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 WASH6PQ9NQA3 447 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 TMEM181Q9P2C4 612 aa13.98□□□□□ -0.17
UBE3B-202ENST00000342494 YARS2Q9Y2Z4 477 aaKnown RBP13.98□□□□□ -0.17
UBE3B-202ENST00000342494 ARGFXA6NJG6 315 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 CDK5R2Q13319 367 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 ZNF684Q5T5D7 378 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 SYNPRQ8TBG9 265 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 MSI2Q96DH6 328 aaKnown RBP13.97□□□□□ -0.17
UBE3B-202ENST00000342494 TSPAN10Q9H1Z9 355 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-202ENST00000342494 DUSP13Q9UII6 198 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 INTS6Q9UL03 887 aaKnown RBP13.97□□□□□ -0.17
UBE3B-202ENST00000342494 A0A1B0GX78 115 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 H0YIV9 168 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 ALOX12BO75342 701 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 SMAD4Q13485 552 aaKnown RBP13.97□□□□□ -0.17
UBE3B-202ENST00000342494 EXT1Q16394 746 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 ZNF534Q76KX8 674 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 ANKRD33Q7Z3H0 272 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 PGBD5Q8N414 524 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 SORT1Q99523 831 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 PRDM9Q9NQV7 894 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 MMP17Q9ULZ9 603 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 UTS2O95399 124 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 TAS2R20P59543 309 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 LTB4RQ15722 352 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 GPR19Q15760 415 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 LTC4SQ16873 150 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 MED25Q71SY5 747 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 C3orf30Q96M34 536 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 TSNAXQ99598 290 aaKnown RBP13.97□□□□□ -0.17
UBE3B-202ENST00000342494 IFNA10P01566 189 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 IFNA4P05014 189 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 REEP5Q00765 189 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 MS4A2Q01362 244 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 RTL6Q6ICC9 239 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 C6orf15Q6UXA7 325 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-202ENST00000342494 CCBE1Q6UXH8 406 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-202ENST00000342494 UBXN10Q96LJ8 280 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 AP1S3Q96PC3 154 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 ZNF696Q9H7X3 374 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 PKLRP30613 574 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 AQP2P41181 271 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 ZNF585AQ6P3V2 769 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 KCTD20Q7Z5Y7 419 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 LKAAEAR1Q8TD35 194 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 SDSLQ96GA7 329 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 PBX4Q9BYU1 374 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 METTL9Q9H1A3 318 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 C6orf106Q9H6K1 298 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-202ENST00000342494 FAIMQ9NVQ4 179 aa13.97□□□□□ -0.17
UBE3B-202ENST00000342494 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.96□□□□□ -0.17
UBE3B-202ENST00000342494 SC5DO75845 299 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 EIF1P41567 113 aaKnown RBP13.96□□□□□ -0.17
UBE3B-202ENST00000342494 SLX4IPQ5VYV7 408 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 HBMQ6B0K9 141 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 SBSNQ6UWP8 590 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 GDPGP1Q6ZNW5 385 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 CBLL1Q75N03 491 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 B3GNT7Q8NFL0 401 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 TMEM163Q8TC26 289 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 PDXPQ96GD0 296 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 C1orf198Q9H425 327 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 EDARQ9UNE0 448 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 V9GY05 133 aa13.96□□□□□ -0.17
UBE3B-202ENST00000342494 ZNF587BE7ETH6 402 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms