RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 CDHR4A6H8M9 788 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 RFXANKO14593 260 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 OR10H2O60403 315 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 BCAS1O75363 584 aaPredicted RBP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 STX11O75558 287 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 ATP6AP2O75787 350 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 UGT2B17O75795 530 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 PDE9AO76083 593 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 OR6B1O95007 311 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 PRSS23O95084 383 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 MFN2O95140 757 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 OXSR1O95747 527 aaPredicted RBP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 WDPCPO95876 746 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 HMGN2P05204 90 aaKnown RBP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 LINGO3P0C6S8 592 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 GGT1P19440 569 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 MATN1P21941 496 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 EVI2BP34910 448 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 SOX3P41225 446 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 RBM34P42696 430 aaKnown RBP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 CYB561P49447 251 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 ZNF133P52736 654 aaPredicted RBP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 DSCR4P56555 118 aaPredicted RBP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 DSTNP60981 165 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 PPIAP62937 165 aaKnown RBP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 DCTN2Q13561 401 aaKnown RBP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 RAB39AQ14964 217 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 PPA1Q15181 289 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 ZNHIT3Q15649 155 aaPredicted RBP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 ADIPOQQ15848 244 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 DECR1Q16698 335 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 EIF2S3LQ2VIR3 472 aaKnown RBP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 DEFB109BQ30KR1 87 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 BTBD16Q32M84 506 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 ZNF750Q32MQ0 723 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 FBXL19-AS1Q494R0 122 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 SGO1Q5FBB7 561 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 NANOGP8Q6NSW7 305 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 KLHL24Q6TFL4 600 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 SCIMPQ6UWF3 145 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 C16orf89Q6UX73 402 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 NHLRC1Q6VVB1 395 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 PATL1Q86TB9 770 aaKnown RBP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 ANKRD13BQ86YJ7 626 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 CLECL1Q8IZS7 167 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 GTPBP8Q8N3Z3 284 aaPredicted RBP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 METTL27Q8N6F8 245 aaPredicted RBP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 FITM2Q8N6M3 262 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 WDSUB1Q8N9V3 476 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 ZPLD1Q8TCW7 415 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 EXOSC8Q96B26 276 aaKnown RBP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 SLC7A6OSQ96CW6 309 aaPredicted RBP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 ZFP3Q96NJ6 502 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 DEFB126Q9BYW3 111 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 OR51I1Q9H343 314 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 NANOGQ9H9S0 305 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 SDHAF3Q9NRP4 125 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 DECR2Q9NUI1 292 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 ACER3Q9NUN7 267 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 BEX4Q9NWD9 120 aaPredicted RBP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 ERVK13-1Q9NX77 482 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 JKAMPQ9P055 326 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 VAPAQ9P0L0 249 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 TESQ9UGI8 421 aaKnown RBP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 BAIAP2L1Q9UHR4 511 aa3.16□□□□□ -1.9
CCDC66-202ENST00000341455 ERRFI1Q9UJM3 462 aaPredicted RBP3.16□□□□□ -1.9
CCDC66-202ENST00000341455 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 ARGFXA6NJG6 315 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 CENPBD1B2RD01 187 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 KLRC4-KLRK1H3BQV0 150 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 F2RL2O00254 374 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 CLIC1O00299 241 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 ACOT8O14734 319 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 BCKDKO14874 412 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 CDC40O60508 579 aaKnown RBP eCLIP3.15□□□□□ -1.9
CCDC66-202ENST00000341455 CBR3O75828 277 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 UNC5CO95185 931 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 UTS2O95399 124 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 IL18BPO95998 194 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 IGHMP01871 453 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 STATHP02808 62 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 GBAP04062 536 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 SERPIND1P05546 499 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 CRHP06850 196 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 CHRM4P08173 479 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 FEN1P39748 380 aaKnown RBP3.15□□□□□ -1.9
CCDC66-202ENST00000341455 EIF1P41567 113 aaKnown RBP3.15□□□□□ -1.9
CCDC66-202ENST00000341455 KCNJ5P48544 419 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 IL1RL1Q01638 556 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 C17orf67Q0P5P2 114 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 OR1C1Q15619 314 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 VMACQ2NL98 169 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 ANKDD1AQ495B1 522 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 EIPR1Q53HC9 387 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 C6orf10Q5SRN2 563 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 GCNT6Q5T4J0 391 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 FAM69AQ5T7M9 428 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 ATP1A1-AS1Q5TC04 95 aa3.15□□□□□ -1.9
CCDC66-202ENST00000341455 REEP3Q6NUK4 255 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms