RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 PRAMEF9Q5VWM5 478 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 GDPGP1Q6ZNW5 385 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 MYPOPQ86VE0 399 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-201ENST00000340660 PALM2Q8IXS6 379 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 CD244Q9BZW8 370 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 SAYSD1Q9NPB0 183 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 MAT2BQ9NZL9 334 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 LCMT1Q9UIC8 334 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 ASB4Q9Y574 426 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 CACNG2Q9Y698 323 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 A0A087WZY1 265 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 A0A1W2PRB8 838 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 PSMD3O43242 534 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 TPM2P07951 284 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 NAT2P11245 290 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 KRT20P35900 424 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 PIK3CGP48736 1102 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 EFNB2P52799 333 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 SEC61A1P61619 476 aaKnown RBP9.27□□□□□ -0.93
ATXN3-201ENST00000340660 NFYCQ13952 458 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 LARS2Q15031 903 aaKnown RBP9.27□□□□□ -0.93
ATXN3-201ENST00000340660 TRIP13Q15645 432 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-201ENST00000340660 C1QTNF12Q5T7M4 302 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 SLC35E4Q6ICL7 350 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 OR4C11Q6IEV9 310 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 KLHL24Q6TFL4 600 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 PPP1R21Q6ZMI0 780 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 KLHDC1Q8N7A1 406 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 CDYL2Q8N8U2 506 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 SLC9A6Q92581 669 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 MED17Q9NVC6 651 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 MYEF2Q9P2K5 600 aaKnown RBP9.27□□□□□ -0.93
ATXN3-201ENST00000340660 CRNNQ9UBG3 495 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-201ENST00000340660 ABCG2Q9UNQ0 655 aa9.27□□□□□ -0.93
ATXN3-201ENST00000340660 DYNC1H1Q14204 4646 aaKnown RBP9.27□□□□□ -0.93
ATXN3-201ENST00000340660 MACROD2A1Z1Q3 448 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 CLDN25C9JDP6 229 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 POC1B-GALNT4F8VUJ3 575 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 PFDN6O15212 129 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 TMPRSS11DO60235 418 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 LHBP01229 141 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 IGLV1-44P01699 117 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 GNAZP19086 355 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 OGNP20774 298 aaKnown RBP9.26□□□□□ -0.93
ATXN3-201ENST00000340660 GABRA5P31644 462 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 EVX1P49640 407 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 SLC35A2P78381 396 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 TIAL1Q01085 375 aaKnown RBP eCLIP9.26□□□□□ -0.93
ATXN3-201ENST00000340660 TRMT12Q53H54 448 aaKnown RBP9.26□□□□□ -0.93
ATXN3-201ENST00000340660 PCID2Q5JVF3 399 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 MRM1Q6IN84 353 aaKnown RBP9.26□□□□□ -0.93
ATXN3-201ENST00000340660 FRRS1Q6ZNA5 592 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 ZCCHC7Q8N3Z6 543 aaKnown RBP9.26□□□□□ -0.93
ATXN3-201ENST00000340660 GALNT4Q8N4A0 578 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 PAPD5Q8NDF8 572 aaKnown RBP9.26□□□□□ -0.93
ATXN3-201ENST00000340660 MFSD3Q96ES6 412 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 PACSIN1Q9BY11 444 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 ZNF385DQ9H6B1 395 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 CMAHPQ9Y471 501 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 DMBT1Q9UGM3 2413 aaPredicted RBP9.26□□□□□ -0.93
ATXN3-201ENST00000340660 HSPG2P98160 4391 aa9.26□□□□□ -0.93
ATXN3-201ENST00000340660 AGAP5A6NIR3 686 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 IFNW1P05000 195 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 CHRM2P08172 466 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 CPMP14384 443 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 PIK3R1P27986 724 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 IER3P46695 156 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 XKP51811 444 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 SNTB2Q13425 540 aaKnown RBP9.25□□□□□ -0.93
ATXN3-201ENST00000340660 TMEM176BQ3YBM2 270 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-201ENST00000340660 TMEM35AQ53FP2 167 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 CLEC6AQ6EIG7 209 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 LRRC8EQ6NSJ5 796 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 APOOLQ6UXV4 268 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 LRP11Q86VZ4 500 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 NDUFA11Q86Y39 141 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 MYO1HQ8N1T3 1032 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 FAM169BQ8N8A8 192 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 FAM71DQ8N9W8 422 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 ZNF473Q8WTR7 871 aaKnown RBP9.25□□□□□ -0.93
ATXN3-201ENST00000340660 SPATA25Q9BR10 227 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 FAM167BQ9BTA0 163 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 PITHD1Q9GZP4 211 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-201ENST00000340660 ANKRA2Q9H9E1 313 aa9.25□□□□□ -0.93
ATXN3-201ENST00000340660 IGHV2OR16-5A0A0B4J2B6 119 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 CTAGE9A4FU28 777 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 ANGPTL1O95841 491 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 CTAGE8P0CG41 777 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 CD28P10747 220 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 GDF5P43026 501 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 CRYBB2P43320 205 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 RAC3P60763 192 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 CCL8P80075 99 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 MRPS22P82650 360 aaKnown RBP9.24□□□□□ -0.93
ATXN3-201ENST00000340660 PAX2Q02962 417 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 C17orf67Q0P5P2 114 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 LCP2Q13094 533 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 C18orf21Q32NC0 220 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-201ENST00000340660 TECRLQ5HYJ1 363 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 OR52E8Q6IFG1 317 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms