RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 UBL7Q96S82 380 aaPredicted RBP12.08□□□□□ -0.48
USP47-202ENST00000339865 FGFBP2Q9BYJ0 223 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 SLC2A9Q9NRM0 540 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 ENPP5Q9UJA9 477 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 IQGAP3Q86VI3 1631 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 KIF13AQ9H1H9 1805 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 ZNF587BE7ETH6 402 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 SLC17A1Q14916 467 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 PAGE3Q5JUK9 113 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 ZDHHC14Q8IZN3 488 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 OR2T11Q8NH01 316 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 MED18Q9BUE0 208 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 IRAK2O43187 625 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 TRAPPC2P0DI81 140 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 TRAPPC2BP0DI82 140 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 OR14L1PQ8NHC6 308 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 ARHGDIGQ99819 225 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 ZDHHC18Q9NUE0 388 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 MARCH4Q9P2E8 410 aaPredicted RBP12.08□□□□□ -0.48
USP47-202ENST00000339865 FBXL4Q9UKA2 621 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 GPR25O00155 361 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 OR8U8P0C7N1 319 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 CDK4P11802 303 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 ATP4BP51164 291 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 GUK1Q16774 197 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 ZNF440Q8IYI8 595 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 KCNRGQ8N5I3 272 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 KDF1Q8NAX2 398 aaPredicted RBP12.07□□□□□ -0.48
USP47-202ENST00000339865 OR13C5Q8NGS8 318 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 OR13C2Q8NGS9 318 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 OARD1Q9Y530 152 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 KCNK5O95279 499 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 OSMP13725 252 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 PRPS1P60891 318 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 ILKQ13418 452 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 ZNF382Q96SR6 550 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 KCMF1Q9P0J7 381 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 HRH3Q9Y5N1 445 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 G3V3Q6 166 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 LATO43561 262 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 GYPBP06028 91 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 ACVRL1P37023 503 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 DUSP3P51452 185 aaPredicted RBP12.07□□□□□ -0.48
USP47-202ENST00000339865 ZNF239Q16600 458 aaKnown RBP12.07□□□□□ -0.48
USP47-202ENST00000339865 PCK2Q16822 640 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 DCAF12L1Q5VU92 463 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 LPCAT3Q6P1A2 487 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 GLB1L2Q8IW92 636 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 M1APQ8TC57 530 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 CDS1Q92903 461 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 MARC2Q969Z3 335 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 PDZD7Q9H5P4 517 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 NT5DC2Q9H857 520 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 HHATLQ9HCP6 504 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 RCE1Q9Y256 329 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 AQP7P3A6NL99 342 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 TGM5O43548 720 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 NCBP2-AS2Q69YL0 99 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 CPOQ8IVL8 374 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 CHRNA9Q9UGM1 479 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 ZNF701M0R085 212 aaPredicted RBP12.07□□□□□ -0.48
USP47-202ENST00000339865 TIA1P31483 386 aaKnown RBP eCLIP12.07□□□□□ -0.489e-7■■■■□ 22.4
USP47-202ENST00000339865 FOXN4Q96NZ1 517 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 CASD1Q96PB1 797 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 CMSS1Q9BQ75 279 aaKnown RBP12.07□□□□□ -0.48
USP47-202ENST00000339865 RAB18Q9NP72 206 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 TRAPPC2LH3BP13 241 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 UGDHO60701 494 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 NME1P15531 152 aaKnown RBP12.07□□□□□ -0.48
USP47-202ENST00000339865 TACR3P29371 465 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 CTSL3PQ5NE16 218 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 SCLYQ96I15 445 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 TAF9BQ9HBM6 251 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 CHST11Q9NPF2 352 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 ATRNL1Q5VV63 1379 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 SCN9AQ15858 1988 aa12.07□□□□□ -0.48
USP47-202ENST00000339865 EDDM13A0A1B0GTR0 161 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 PDGFAP04085 211 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 MZT1Q08AG7 82 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 ACSM1Q08AH1 577 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 SNTB1Q13884 538 aaKnown RBP12.06□□□□□ -0.48
USP47-202ENST00000339865 MSS51Q4VC12 460 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 CATSPEREQ5SY80 951 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 PXDC1Q5TGL8 231 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 PLAG1Q6DJT9 500 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 LRRC18Q8N456 261 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 SDR9C7Q8NEX9 313 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 OR4N2Q8NGD1 307 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 NOL4LQ96MY1 436 aaPredicted RBP12.06□□□□□ -0.48
USP47-202ENST00000339865 C11orf84Q9BUA3 381 aaPredicted RBP12.06□□□□□ -0.48
USP47-202ENST00000339865 BOCQ9BWV1 1114 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 SPATA31A6Q5VVP1 1343 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 NEO1Q92859 1461 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 CRXO43186 299 aaPredicted RBP12.06□□□□□ -0.48
USP47-202ENST00000339865 SLC11A1P49279 550 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 C6orf89Q6UWU4 347 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 C17orf107Q6ZR85 190 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 FAM122BQ7Z309 247 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 ASPGQ86U10 573 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 PEX11GQ96HA9 241 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms