RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 FANK1Q8TC84 345 aa9.95□□□□□ -0.82
RTN3-201ENST00000338850 HAVCR2Q8TDQ0 301 aa9.95□□□□□ -0.82
RTN3-201ENST00000338850 KISS1RQ969F8 398 aaPredicted RBP9.95□□□□□ -0.82
RTN3-201ENST00000338850 OR2A5Q96R48 311 aa9.95□□□□□ -0.82
RTN3-201ENST00000338850 SECISBP2Q96T21 854 aaKnown RBP9.95□□□□□ -0.82
RTN3-201ENST00000338850 TM9SF2Q99805 663 aa9.95□□□□□ -0.82
RTN3-201ENST00000338850 ZNF559Q9BR84 538 aa9.95□□□□□ -0.82
RTN3-201ENST00000338850 TPK1Q9H3S4 243 aa9.95□□□□□ -0.82
RTN3-201ENST00000338850 ZCCHC4Q9H5U6 513 aa9.95□□□□□ -0.82
RTN3-201ENST00000338850 XKR8Q9H6D3 395 aa9.95□□□□□ -0.82
RTN3-201ENST00000338850 DDX28Q9NUL7 540 aaKnown RBP9.95□□□□□ -0.82
RTN3-201ENST00000338850 SIDT1Q9NXL6 827 aaKnown RBP9.95□□□□□ -0.82
RTN3-201ENST00000338850 ACTR10Q9NZ32 417 aa9.95□□□□□ -0.82
RTN3-201ENST00000338850 COPZ2Q9P299 210 aa9.95□□□□□ -0.82
RTN3-201ENST00000338850 PILRAQ9UKJ1 303 aa9.95□□□□□ -0.82
RTN3-201ENST00000338850 KCNK6Q9Y257 313 aa9.95□□□□□ -0.82
RTN3-201ENST00000338850 YARS2Q9Y2Z4 477 aaKnown RBP9.95□□□□□ -0.82
RTN3-201ENST00000338850 OR1A2Q9Y585 309 aa9.95□□□□□ -0.82
RTN3-201ENST00000338850 NOX1Q9Y5S8 564 aa9.95□□□□□ -0.82
RTN3-201ENST00000338850 U3KQA8 63 aa9.95□□□□□ -0.82
RTN3-201ENST00000338850 A0A0B4J293 547 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 PRSS38A1L453 326 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 C7orf66A4D0T2 115 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 SCAMP1O15126 338 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 ZNF749O43361 778 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 CHP2O43745 196 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 PRKRAO75569 313 aaKnown RBP9.94□□□□□ -0.82
RTN3-201ENST00000338850 ITGA10O75578 1167 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 MT-CO3P00414 261 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 SERPINA3P01011 423 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 CSF2P04141 144 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 ZGLP1P0C6A0 271 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 CELP19835 753 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 NPR2P20594 1047 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 SLC6A1P30531 599 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 RABIFP47224 123 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 AVPR1BP47901 424 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 HNRNPKP61978 463 aaKnown RBP eCLIP9.94□□□□□ -0.82
RTN3-201ENST00000338850 LSM11P83369 360 aaKnown RBP eCLIP9.94□□□□□ -0.82
RTN3-201ENST00000338850 GGTLC2Q14390 218 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 NFATC4Q14934 902 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 DUSP5Q16690 384 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 CDCP2Q5VXM1 449 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 PYHIN1Q6K0P9 492 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 ARHGAP11AQ6P4F7 1023 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 RNF44Q7L0R7 432 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 PARGQ86W56 976 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 CDK20Q8IZL9 346 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 SIRT6Q8N6T7 355 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 ZNF655Q8N720 491 aaPredicted RBP9.94□□□□□ -0.82
RTN3-201ENST00000338850 SLC16A11Q8NCK7 471 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 OR4F15Q8NGB8 312 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 TMEM239Q8WW34 195 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 LCN9Q8WX39 176 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 CDS1Q92903 461 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 CTHRC1Q96CG8 243 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 RNF31Q96EP0 1072 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 DCBLD2Q96PD2 775 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 YIPF4Q9BSR8 244 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 NDC1Q9BTX1 674 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 ALG8Q9BVK2 526 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 ACOXLQ9NUZ1 547 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 ING3Q9NXR8 418 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 SPHK1Q9NYA1 384 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 ABRACLQ9P1F3 81 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 SERTAD3Q9UJW9 196 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 GPR52Q9Y2T5 361 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 LAMA5O15230 3695 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 ASXL3Q9C0F0 2248 aa9.94□□□□□ -0.82
RTN3-201ENST00000338850 A0A0B4J2E0 115 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 FAM240BA0A1B0GVZ2 78 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 A0A1B0GX12 115 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 GLOD5A6NK44 160 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 C12orf71A8MTZ7 269 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 ISM1B1AKI9 464 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 CDC42EP2O14613 210 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 CTDSPLO15194 276 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 BRINP1O60477 761 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 HPGDSO60760 199 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 ALX3O95076 343 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 NKX2-2O95096 273 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 IFNGP01579 166 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 ZNF888P0CJ79 500 aaPredicted RBP9.93□□□□□ -0.82
RTN3-201ENST00000338850 MYF5P13349 255 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 TCEA1P23193 301 aaKnown RBP9.93□□□□□ -0.82
RTN3-201ENST00000338850 APEX1P27695 318 aaKnown RBP9.93□□□□□ -0.82
RTN3-201ENST00000338850 ITPKBP27987 946 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 THBS2P35442 1172 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 SOX18P35713 384 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 TALDO1P37837 337 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 CD79BP40259 229 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 EIF2S3P41091 472 aaKnown RBP9.93□□□□□ -0.82
RTN3-201ENST00000338850 GPR4P46093 362 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 PSMD4P55036 377 aaKnown RBP9.93□□□□□ -0.82
RTN3-201ENST00000338850 FXYD6P3P58550 94 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 RAB8AP61006 207 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 RRAS2P62070 204 aaPredicted RBP9.93□□□□□ -0.82
RTN3-201ENST00000338850 BTN3A2P78410 334 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 HSF2Q03933 536 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 FAPQ12884 760 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms