RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 CHRNA9Q9UGM1 479 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 U3KQV3 271 aa12.39□□□□□ -0.43
TUBA1B-202ENST00000336023 TRBV4-1A0A0J9YWV2 114 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 TMEM72A0PK05 275 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 H0Y3Z8 333 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 LINC01387J3KSC0 135 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 TNFRSF11BO00300 401 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 ATXN7O15265 892 aaPredicted RBP12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 HCN1O60741 890 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 PEPDP12955 493 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 CHMP24386 653 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 HMGA2P52926 109 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 PPP1R8Q12972 351 aaKnown RBP12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 RCN1Q15293 331 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.38□□□□□ -0.432e-6■■□□□ 14.5
TUBA1B-202ENST00000336023 ZNF324BQ6AW86 544 aaPredicted RBP12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 AMIGO2Q86SJ2 522 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 LILRA2Q8N149 483 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 ATP6V1C2Q8NEY4 427 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 NEIL3Q8TAT5 605 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 SLC7A13Q8TCU3 470 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 TMEM255BQ8WV15 326 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 FAR1Q8WVX9 515 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 PKP2Q99959 881 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 EXO5Q9H790 373 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 NTN4Q9HB63 628 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 SAMHD1Q9Y3Z3 626 aaKnown RBP12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 LYVE1Q9Y5Y7 322 aa12.38□□□□□ -0.43
TUBA1B-202ENST00000336023 IGKV1D-42A0A075B6H8 117 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 TTLL8A6PVC2 850 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 H3BML4 177 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 BAG2O95816 211 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 OPN1LWP04000 364 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 PTNP21246 168 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 GCKP35557 465 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 MAP2K6P52564 334 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 IST1P53990 364 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 RAC1P63000 192 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 NFATC3Q12968 1075 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 SELENBP1Q13228 472 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 PRR30Q53SZ7 412 aaPredicted RBP12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 DCST1Q5T197 706 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 HMBOX1Q6NT76 420 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 C3orf33Q6P1S2 294 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 PODNL1Q6PEZ8 512 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 P3H2Q8IVL5 708 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 TMEM239Q8WW34 195 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 ACOT11Q8WXI4 607 aaPredicted RBP12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 ABTB1Q969K4 478 aaPredicted RBP12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 RELTQ969Z4 430 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 ALPK1Q96QP1 1244 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 FUZQ9BT04 418 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 BDH2Q9BUT1 245 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 ZNF426Q9BUY5 554 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 OR11A1Q9GZK7 315 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 SEMA6AQ9H2E6 1030 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 PLSCR2Q9NRY7 297 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 SPIN1Q9Y657 262 aaPredicted RBP12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 ZNF407Q9C0G0 2248 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 RP1L1Q8IWN7 2480 aaPredicted RBP12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 A0A087WUU8 490 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 A0A1B0GVC2 190 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 ZC3H12DA2A288 527 aaKnown RBP12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 A8MVM7 634 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 ZNF208O43345 1280 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 E2F6O75461 281 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 BMP7P18075 431 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 POU3F2P20265 443 aaPredicted RBP12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 RBM34P42696 430 aaKnown RBP12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 LIMS1P48059 325 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 STARP49675 285 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 LSM11P83369 360 aaKnown RBP eCLIP12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 EGR4Q05215 589 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 SEC23BQ15437 767 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 EXOC3L2Q2M3D2 409 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 TMEM176BQ3YBM2 270 aaPredicted RBP12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 TTC33Q6PID6 262 aaPredicted RBP12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 TBPL2Q6SJ96 375 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 ZNF730Q6ZMV8 503 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 PQLC1Q8N2U9 271 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 LSM14AQ8ND56 463 aaKnown RBP12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 OR4C15Q8NGM1 316 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 SMPDL3BQ92485 455 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 CENPNQ96H22 339 aaPredicted RBP12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 HS6ST2Q96MM7 605 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 GPR137Q96N19 417 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 EPYCQ99645 322 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 TMEM43Q9BTV4 400 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 DCLRE1BQ9H816 532 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 ASF1BQ9NVP2 202 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 SPRR3Q9UBC9 169 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 STOML1Q9UBI4 398 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 TMCC3Q9ULS5 477 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 AP4B1Q9Y6B7 739 aa12.37□□□□□ -0.43
TUBA1B-202ENST00000336023 NCKAP5O14513 1909 aa12.36□□□□□ -0.43
TUBA1B-202ENST00000336023 DNAJC13O75165 2243 aa12.36□□□□□ -0.43
TUBA1B-202ENST00000336023 SVILO95425 2214 aa12.36□□□□□ -0.43
TUBA1B-202ENST00000336023 KPNA4O00629 521 aaPredicted RBP12.36□□□□□ -0.43
TUBA1B-202ENST00000336023 MGRN1O60291 552 aa12.36□□□□□ -0.43
TUBA1B-202ENST00000336023 NPIPB7O75200 414 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms