RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 SRSF5Q13243 272 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 TRAPPC6BQ86SZ2 158 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR1L3Q8NH93 324 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 TMEM126AQ9H061 195 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 MAP1LC3AQ9H492 121 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 GALNT9Q9HCQ5 603 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 ASCL3Q9NQ33 180 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 NAT8BQ9UHF3 227 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 A6NHS1 94 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 MMP20O60882 483 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 RNGTTO60942 597 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 FABP3P05413 133 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 HNRNPA1P09651 372 aaKnown RBP eCLIP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 AHRP35869 848 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 KLF3P57682 345 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 FKBP1AP62942 108 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 DSC1Q08554 894 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 CLN3Q13286 438 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 HLXQ14774 488 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 TMEM95Q3KNT9 176 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 LIPMQ5VYY2 423 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 TET2Q6N021 2002 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 CUZD1Q86UP6 607 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 MEGF10Q96KG7 1140 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 LMF1Q96S06 567 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 AMNQ9BXJ7 453 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 SDCBP2Q9H190 292 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 ANKRD19PQ9H560 264 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF701Q9NV72 531 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 AMDHD2Q9Y303 409 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 TSPAN11A1L157 253 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 CDC14CA4D256 554 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 MT-CO3P00414 261 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 SRGNP10124 158 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 DDTP30046 118 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 RFX5P48382 616 aaPredicted RBP5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 GSK3AP49840 483 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 PPOXP50336 477 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 FCGRTP55899 365 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 FAM3AP98173 230 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 SRSF4Q08170 494 aaKnown RBP5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 CDC20Q12834 499 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.71□□□□□ -1.491e-6■□□□□ 8.8
CDC42BPA-201ENST00000334218 SLC35D3Q5M8T2 416 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 ADAD1Q96M93 576 aaKnown RBP5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF583Q96ND8 569 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 CNN2Q99439 309 aaKnown RBP5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 SLCO5A1Q9H2Y9 848 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 CDC42EP4Q9H3Q1 356 aaKnown RBP5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 KCNK15Q9H427 330 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 UCK1Q9HA47 277 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF629Q9UEG4 869 aaPredicted RBP5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 SLC22A13Q9Y226 551 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 ADAMTSL3P82987 1691 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 COL5A2P05997 1499 aaPredicted RBP5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 TNFRSF17Q02223 184 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 NRG1Q02297 640 aaPredicted RBP5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 ILKQ13418 452 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZYXQ15942 572 aaKnown RBP5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 C2orf27AQ580R0 203 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 BPIFB2Q8N4F0 458 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR51Q1Q8NH59 317 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 RHOVQ96L33 236 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 BARHL1Q9BZE3 327 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR52D1Q9H346 318 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 FAM217BQ9NTX9 383 aaPredicted RBP5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 FZD1Q9UP38 647 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 HS3ST4Q9Y661 456 aa5.71□□□□□ -1.49
CDC42BPA-201ENST00000334218 ENPP3O14638 875 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 TP53I11O14683 189 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 HTR1BP28222 390 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC6A12P48065 614 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 KCNJ3P48549 501 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 SHHQ15465 462 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 NT5DC1Q5TFE4 455 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF433Q8N7K0 673 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 LPAR1Q92633 364 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 COQ10BQ9H8M1 238 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 PURGQ9UJV8 347 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 TCRBV21S2A2A0A5A6 115 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 hCG_2039718K7EN88 272 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 TNFSF11O14788 317 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 CLDN9O95484 217 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 PLAUP00749 431 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 FECHP22830 423 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 KDELR2P33947 212 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 ATP1B3P54709 279 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 ETFDHQ16134 617 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 PWWP2BQ6NUJ5 590 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 MRPL55Q7Z7F7 128 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 BPIFA4PQ86YQ2 179 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 WDR34Q96EX3 536 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 UBXN10Q96LJ8 280 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC38A3Q99624 504 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM175Q9BSA9 504 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 SPNS1Q9H2V7 528 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 ACSS3Q9H6R3 686 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 POPDC2Q9HBU9 364 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 NOX3Q9HBY0 568 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 AGO4Q9HCK5 861 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms