RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 VITQ6UXI7 678 aa9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 FUNDC1Q8IVP5 155 aa9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 LSMEM2Q8N112 164 aa9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 MCOLN1Q9GZU1 580 aa9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 MED17Q9NVC6 651 aa9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 CAMK2AQ9UQM7 478 aa9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 FCF1Q9Y324 198 aaKnown RBP9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 TDRD15B5MCY1 1934 aaKnown RBP9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 GLOD5A6NK44 160 aa9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 CEBPZOSA8MTT3 80 aa9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 LDB2O43679 373 aa9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 FGF4P08620 206 aa9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 MRPS6P82932 125 aaKnown RBP9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 ZNF620Q6ZNG0 422 aa9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 CPNE8Q86YQ8 564 aa9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 TSTD1Q8NFU3 115 aa9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 RBM14Q96PK6 669 aaKnown RBP9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 TAF9BQ9HBM6 251 aa9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 ACSS1Q9NUB1 689 aaPredicted RBP9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 DUS2Q9NX74 493 aaKnown RBP9.74□□□□□ -0.85
SPTBN1-201ENST00000333896 A6NIZ1 184 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 PEX12O00623 359 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 DVL2O14641 736 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 CXCL14O95715 111 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 RAP1BP61224 184 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 TMEM130Q8N3G9 435 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 ANKLE1Q8NAG6 615 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 OR7D2Q96RA2 312 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 ZDHHC3Q9NYG2 299 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 TMEM225BP0DP42 221 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 RBP2P50120 134 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 BLKP51451 505 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 SP3Q02447 781 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 PIN1Q13526 163 aaPredicted RBP9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 SLC18B1Q6NT16 456 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 ZNF566Q969W8 418 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 NUS1Q96E22 293 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 NDRG2Q9UN36 371 aaKnown RBP9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 FAM155AB1AL88 458 aaPredicted RBP9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 H7BY64 318 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 ITGB2P05107 769 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 PFKLP17858 780 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 CCKARP32238 428 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 TPPP2P59282 170 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 DLK1P80370 383 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 TMEM164Q5U3C3 297 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 C9orf57Q5W0N0 161 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 IL17RDQ8NFM7 739 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 MAP3K3Q99759 626 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 TTPALQ9BTX7 342 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 EDEM2Q9BV94 578 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 RAB9BQ9NP90 201 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 XRCC3O43542 346 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 DPM1O60762 260 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 PYCR1P32322 319 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 ACTR1BP42025 376 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 KIAA1024LP59773 190 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 C21orf62-AS1Q17RA5 79 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 HENMT1Q5T8I9 393 aaKnown RBP9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 SLC6A19Q695T7 634 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 NPAS4Q8IUM7 802 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 STPG2Q8N412 459 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 IL17RCQ8NAC3 791 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 DEC1Q9P2X7 70 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 POP4O95707 220 aaKnown RBP9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 MGAT3Q09327 533 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 APOBEC3HQ6NTF7 200 aaKnown RBP9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 ZNF704Q6ZNC4 412 aaPredicted RBP9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 SULF2Q8IWU5 870 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 OR5AK2Q8NH90 309 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 TMEM163Q8TC26 289 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 CMBLQ96DG6 245 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 DOCK2Q92608 1830 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 RTCAO00442 366 aaKnown RBP9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 OR10J4P0C629 311 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 LIPCP11150 499 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 CCR7P32248 378 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 IDUAP35475 653 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 CPOXP36551 454 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 SEMG2Q02383 582 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 TECRLQ5HYJ1 363 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 ZNF100Q8IYN0 542 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 ZDHHC14Q8IZN3 488 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 KIAA1958Q8N8K9 716 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 PCYT2Q99447 389 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 XYLT2Q9H1B5 865 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 MIOXQ9UGB7 285 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 PCDHGA9Q9Y5G4 932 aaKnown RBP9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 ROBO2Q9HCK4 1378 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 A0A1B0GUH1 482 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 FTCDNL1E5RQL4 147 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 GABARAPH6UMI1 98 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 AAK1Q2M2I8 961 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 TMEM151BQ8IW70 566 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 ARFGAP1Q8N6T3 406 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 VGLL2Q8N8G2 317 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 OR51L1Q8NGJ5 315 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 PIK3C2BO00750 1634 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 MTNR1BP49286 362 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 RAG2P55895 527 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms