RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 BPIFB2Q8N4F0 458 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 ELOVL3Q9HB03 270 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 TXNL4BQ9NX01 149 aaKnown RBP19.67■□□□□ 0.74
RNF40-201ENST00000324685 GNG13Q9P2W3 67 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 SNRNP70P08621 437 aaKnown RBP19.67■□□□□ 0.74
RNF40-201ENST00000324685 AOAHP28039 575 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 GABRA5P31644 462 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 EXOSC7Q15024 291 aaKnown RBP19.67■□□□□ 0.74
RNF40-201ENST00000324685 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.67■□□□□ 0.742e-7■■■■□ 24
RNF40-201ENST00000324685 SVBPQ8N300 66 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 C3orf30Q96M34 536 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 CCNL2Q96S94 520 aaPredicted RBP19.67■□□□□ 0.74
RNF40-201ENST00000324685 LINC00597Q9H2U6 94 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 GPR39O43194 453 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 CACNG3O60359 315 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 GYPBP06028 91 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 FOSL1P15407 271 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 TIMP2P16035 220 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 LTB4RQ15722 352 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 SSX2Q16385 188 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 SLC22A25Q6T423 547 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 NPAP1Q9NZP6 1156 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 SMAD6O43541 496 aaKnown RBP19.66■□□□□ 0.74
RNF40-201ENST00000324685 HOXC5Q00444 222 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 TATDN3Q17R31 274 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 GGTA1PQ4G0N0 100 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 PARS2Q7L3T8 475 aaKnown RBP19.66■□□□□ 0.74
RNF40-201ENST00000324685 GIMAP1Q8WWP7 306 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 SLC19A3Q9BZV2 496 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 MKRN2Q9H000 416 aaKnown RBP19.66■□□□□ 0.74
RNF40-201ENST00000324685 PGAP2Q9UHJ9 254 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 ADAM23O75077 832 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 GDF1P27539 372 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 BCL7AQ4VC05 210 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 ATOH8Q96SQ7 321 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 ARNT2Q9HBZ2 717 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 ACPPP15309 386 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 PDE7AQ13946 482 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 ZNF546Q86UE3 836 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 LACC1Q8IV20 430 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 RHOXF1Q8NHV9 184 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 SGK3Q96BR1 496 aa19.66■□□□□ 0.74
RNF40-201ENST00000324685 PTRH2Q9Y3E5 179 aaKnown RBP19.66■□□□□ 0.74
RNF40-201ENST00000324685 SLC10A3P09131 477 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 ARAFP10398 606 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 CYBAP13498 195 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 PPP3CBP16298 524 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 GABRB3P28472 473 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 MMP12P39900 470 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 OPRD1P41143 372 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 THBS3P49746 956 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 ARG2P78540 354 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 DEFB133Q30KQ1 61 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 VASNQ6EMK4 673 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 C3orf58Q8NDZ4 430 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 ASB11Q8WXH4 323 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 GTF2H4Q92759 462 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 ZNF578Q96N58 590 aaPredicted RBP19.65■□□□□ 0.74
RNF40-201ENST00000324685 SAMD10Q9BYL1 202 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 GDE1Q9NZC3 331 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 RCE1Q9Y256 329 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 LIPCP11150 499 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 ZNF44P15621 663 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 RBMS2Q15434 407 aaKnown RBP19.65■□□□□ 0.74
RNF40-201ENST00000324685 DAZAP1Q96EP5 407 aaKnown RBP19.65■□□□□ 0.74
RNF40-201ENST00000324685 PRSS38A1L453 326 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 SLC9B1P1A6NJY1 282 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 TMEM189-UBE2V1I3L0A0 370 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 MED6O75586 246 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 TNK1Q13470 666 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 MFSD9Q8NBP5 474 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 OR56B4Q8NH76 319 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 IL1F10Q8WWZ1 152 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 RTL10Q7L3V2 364 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 MICU1Q9BPX6 476 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 IL37Q9NZH6 218 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 TRBV11-1A0A0K0K1C0 115 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 GPR75O95800 540 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 ZNF91Q05481 1191 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 NDUFAF7Q7L592 441 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 BPHLQ86WA6 291 aaPredicted RBP19.65■□□□□ 0.74
RNF40-201ENST00000324685 USB1Q9BQ65 265 aaKnown RBP19.65■□□□□ 0.74
RNF40-201ENST00000324685 ACKR4Q9NPB9 350 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 GPR160Q9UJ42 338 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 MOKQ9UQ07 419 aa19.65■□□□□ 0.74
RNF40-201ENST00000324685 PLSCR5A0PG75 271 aa19.64■□□□□ 0.74
RNF40-201ENST00000324685 MFGE8Q08431 387 aaPredicted RBP19.64■□□□□ 0.74
RNF40-201ENST00000324685 OR4F15Q8NGB8 312 aa19.64■□□□□ 0.74
RNF40-201ENST00000324685 FCRL1Q96LA6 429 aa19.64■□□□□ 0.74
RNF40-201ENST00000324685 ADOQ96SZ5 270 aa19.64■□□□□ 0.74
RNF40-201ENST00000324685 ANKRD19PQ9H560 264 aa19.64■□□□□ 0.74
RNF40-201ENST00000324685 C1GALT1Q9NS00 363 aa19.64■□□□□ 0.74
RNF40-201ENST00000324685 STK17BO94768 372 aa19.64■□□□□ 0.73
RNF40-201ENST00000324685 SCAF4O95104 1147 aaKnown RBP19.64■□□□□ 0.73
RNF40-201ENST00000324685 TK1P04183 234 aa19.64■□□□□ 0.73
RNF40-201ENST00000324685 HOXD12P35452 270 aa19.64■□□□□ 0.73
RNF40-201ENST00000324685 ZNF808Q8N4W9 903 aaPredicted RBP19.64■□□□□ 0.73
RNF40-201ENST00000324685 ZNF480Q8WV37 535 aa19.64■□□□□ 0.73
RNF40-201ENST00000324685 CMSS1Q9BQ75 279 aaKnown RBP19.64■□□□□ 0.73
RNF40-201ENST00000324685 MCOLN1Q9GZU1 580 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms