RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 KRT20P35900 424 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 OR3A3P47888 321 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 ZNF136P52737 540 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 NRG3P56975 720 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 PLCXD2Q0VAA5 305 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 KCNAB2Q13303 367 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 GPR50Q13585 617 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 IL10RAQ13651 578 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 OTUD3Q5T2D3 398 aaPredicted RBP11.69□□□□□ -0.54
DDX39A-202ENST00000324340 CTRB2Q6GPI1 263 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 LYPD8Q6UX82 237 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 DEF8Q6ZN54 512 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 ZBTB46Q86UZ6 589 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 CYP4Z1Q86W10 505 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 RAB43Q86YS6 212 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 TAGAPQ8N103 731 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 ZNF527Q8NB42 609 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 FAM71CQ8NEG0 241 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 TOR1AIP2Q8NFQ8 470 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 RNF170Q96K19 258 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 PRRC1Q96M27 445 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 SIGLEC11Q96RL6 698 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 ADOQ96SZ5 270 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 POLR2J2Q9GZM3 115 aaKnown RBP11.69□□□□□ -0.54
DDX39A-202ENST00000324340 POLR2J3Q9H1A7 115 aaKnown RBP11.69□□□□□ -0.54
DDX39A-202ENST00000324340 TMA7Q9Y2S6 64 aaKnown RBP11.69□□□□□ -0.54
DDX39A-202ENST00000324340 SAMHD1Q9Y3Z3 626 aaKnown RBP11.69□□□□□ -0.54
DDX39A-202ENST00000324340 PCDHGB6Q9Y5F9 930 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 NPFFR2Q9Y5X5 522 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 EXPH5Q8NEV8 1989 aa11.69□□□□□ -0.54
DDX39A-202ENST00000324340 A0A1W2PQD3 144 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 SERINC4A6NH21 518 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 BCKDKO14874 412 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 ZNF354AO60765 605 aaPredicted RBP11.68□□□□□ -0.54
DDX39A-202ENST00000324340 FMO6PO60774 539 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 PPM1BO75688 479 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 UTS2O95399 124 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 LIPCP11150 499 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 TGFBR2P37173 567 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 ARHGDIAP52565 204 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 NKX2-5P52952 324 aaPredicted RBP11.68□□□□□ -0.54
DDX39A-202ENST00000324340 RGS8P57771 180 aaPredicted RBP11.68□□□□□ -0.54
DDX39A-202ENST00000324340 VBP1P61758 197 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 CTAG1AP78358 180 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 SPIBQ01892 262 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 ZIK1Q3SY52 487 aaPredicted RBP11.68□□□□□ -0.54
DDX39A-202ENST00000324340 ESCO2Q56NI9 601 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 COLEC12Q5KU26 742 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 MRGPREQ86SM8 312 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 NOXA1Q86UR1 476 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 TSPYL5Q86VY4 417 aaPredicted RBP11.68□□□□□ -0.54
DDX39A-202ENST00000324340 PRR22Q8IZ63 422 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 TCTE3Q8IZS6 198 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 RNF138Q8WVD3 245 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 RPL3LQ92901 407 aaKnown RBP11.68□□□□□ -0.54
DDX39A-202ENST00000324340 IP6K3Q96PC2 410 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 DEFB126Q9BYW3 111 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 NUAK2Q9H093 628 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 NMNAT1Q9HAN9 279 aaPredicted RBP11.68□□□□□ -0.54
DDX39A-202ENST00000324340 ZNF160Q9HCG1 818 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 ACOT13Q9NPJ3 140 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 RPRD1BQ9NQG5 326 aaKnown RBP11.68□□□□□ -0.54
DDX39A-202ENST00000324340 POLE4Q9NR33 117 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 P4HTMQ9NXG6 502 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 DNAJB12Q9NXW2 375 aaKnown RBP11.68□□□□□ -0.54
DDX39A-202ENST00000324340 FLRT3Q9NZU0 649 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 SLC35A3Q9Y2D2 325 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 SPEF1Q9Y4P9 236 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 MAGED1Q9Y5V3 778 aaPredicted RBP11.68□□□□□ -0.54
DDX39A-202ENST00000324340 U3KQV3 271 aa11.68□□□□□ -0.54
DDX39A-202ENST00000324340 ZFHX2Q9C0A1 2572 aaPredicted RBP11.68□□□□□ -0.54
DDX39A-202ENST00000324340 A0A1W2PRQ8 180 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 ARRDC5A6NEK1 342 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 ZSCAN5BA6NJL1 495 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 ALG1L2C9J202 215 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 TNFRSF11BO00300 401 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 WWP2O00308 870 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 CCRL2O00421 344 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 FRS3O43559 492 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 ICOSLGO75144 302 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 GADD45GO95257 159 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 CELA2AP08217 269 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 FBXO45P0C2W1 286 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 IL7P13232 177 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 CLK1P49759 484 aaKnown RBP11.67□□□□□ -0.54
DDX39A-202ENST00000324340 CDH12P55289 794 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 SMIM11AP58511 58 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 PPP1R8Q12972 351 aaKnown RBP11.67□□□□□ -0.54
DDX39A-202ENST00000324340 CHAF1BQ13112 559 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 PIN1Q13526 163 aaPredicted RBP11.67□□□□□ -0.54
DDX39A-202ENST00000324340 DGCR6Q14129 220 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 EFR3AQ14156 821 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 SPANXN2Q5MJ10 180 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 TMEM236Q5W0B7 351 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 H3F3CQ6NXT2 135 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 C16orf47Q6ZP98 133 aaPredicted RBP11.67□□□□□ -0.54
DDX39A-202ENST00000324340 CREB3L2Q70SY1 520 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 RANBP3LQ86VV4 465 aaPredicted RBP11.67□□□□□ -0.54
DDX39A-202ENST00000324340 HS3ST5Q8IZT8 346 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 PARP16Q8N5Y8 322 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms