RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 NACC2Q96BF6 587 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 TNFRSF13CQ96RJ3 184 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 DEFB126Q9BYW3 111 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 MMP25Q9NPA2 562 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 ERGIC3Q9Y282 383 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 M0R082 166 aa16.27■□□□□ 0.2
RAB39A-201ENST00000320578 MAN1A2O60476 641 aa16.27■□□□□ 0.2
RAB39A-201ENST00000320578 ATE1O95260 518 aa16.27■□□□□ 0.2
RAB39A-201ENST00000320578 RAB36O95755 333 aa16.27■□□□□ 0.2
RAB39A-201ENST00000320578 FBXO45P0C2W1 286 aa16.27■□□□□ 0.2
RAB39A-201ENST00000320578 FUT1P19526 365 aa16.27■□□□□ 0.2
RAB39A-201ENST00000320578 FOLR3P41439 243 aa16.27■□□□□ 0.2
RAB39A-201ENST00000320578 MTNR1AP48039 350 aa16.27■□□□□ 0.2
RAB39A-201ENST00000320578 PRPS1P60891 318 aa16.27■□□□□ 0.2
RAB39A-201ENST00000320578 RPS4XP62701 263 aaKnown RBP16.27■□□□□ 0.2
RAB39A-201ENST00000320578 C17orf67Q0P5P2 114 aa16.27■□□□□ 0.2
RAB39A-201ENST00000320578 TIGD6Q17RP2 521 aa16.27■□□□□ 0.2
RAB39A-201ENST00000320578 THSD4Q6ZMP0 1018 aa16.27■□□□□ 0.2
RAB39A-201ENST00000320578 BCDIN3DQ7Z5W3 292 aaKnown RBP16.27■□□□□ 0.2
RAB39A-201ENST00000320578 B4GALNT2Q8NHY0 566 aa16.27■□□□□ 0.2
RAB39A-201ENST00000320578 GPR119Q8TDV5 335 aa16.27■□□□□ 0.2
RAB39A-201ENST00000320578 ZFAND2BQ8WV99 257 aa16.27■□□□□ 0.2
RAB39A-201ENST00000320578 GPX7Q96SL4 187 aaPredicted RBP16.27■□□□□ 0.2
RAB39A-201ENST00000320578 IFT27Q9BW83 186 aa16.27■□□□□ 0.2
RAB39A-201ENST00000320578 ENKD1Q9H0I2 346 aa16.27■□□□□ 0.2
RAB39A-201ENST00000320578 LIN28AQ9H9Z2 209 aaKnown RBP16.27■□□□□ 0.2
RAB39A-201ENST00000320578 HS3ST3B1Q9Y662 390 aa16.27■□□□□ 0.2
RAB39A-201ENST00000320578 CCDC187A0A096LP49 1063 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 PLD2O14939 933 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 IDH3BO43837 385 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 ZNF354AO60765 605 aaPredicted RBP16.26■□□□□ 0.19
RAB39A-201ENST00000320578 DKK1O94907 266 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 CH25HO95992 272 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 MT-CO3P00414 261 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 PTHP01270 115 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 COX6A1P12074 109 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 GP1BBP13224 206 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 PTNP21246 168 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 TACR3P29371 465 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 HTR3AP46098 478 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 CDH11P55287 796 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 CTF1Q16619 201 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 ARHGAP11AQ6P4F7 1023 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 DPY19L2P2Q6ZN68 376 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 GLRX5Q86SX6 157 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 P2RY8Q86VZ1 359 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 OR52I1Q8NGK6 324 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 OR51A7Q8NH64 312 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 LGALS12Q96DT0 336 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 DEPDC7Q96QD5 511 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 JAM3Q9BX67 310 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 B3GNT4Q9C0J1 378 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 H2AFY2Q9P0M6 372 aaPredicted RBP16.26■□□□□ 0.19
RAB39A-201ENST00000320578 EXOGQ9Y2C4 368 aaKnown RBP16.26■□□□□ 0.19
RAB39A-201ENST00000320578 GPR52Q9Y2T5 361 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 TRAV27A0A087WT01 109 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 IGLV3-32A0A0A0MS00 114 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 VGLL3A8MV65 326 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 WWP2O00308 870 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 SLC22A1O15245 554 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 CSO75390 466 aaKnown RBP16.26■□□□□ 0.19
RAB39A-201ENST00000320578 ADRA2AP08913 450 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 JMJD7P0C870 316 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 HK1P19367 917 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 MSX1P28360 303 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 TGFBR2P37173 567 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 FBXW4P57775 412 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 ZNF74Q16587 644 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 NTRK2Q16620 822 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 C5orf46Q6UWT4 87 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 CXXC5Q7LFL8 322 aaKnown RBP16.26■□□□□ 0.19
RAB39A-201ENST00000320578 ARMC10Q8N2F6 343 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 NANOGP1Q8N7R0 232 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 RNFT2Q96EX2 444 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 SH3YL1Q96HL8 342 aaPredicted RBP16.26■□□□□ 0.19
RAB39A-201ENST00000320578 MND1Q9BWT6 205 aa16.26■□□□□ 0.19
RAB39A-201ENST00000320578 HINT3Q9NQE9 182 aaKnown RBP16.26■□□□□ 0.19
RAB39A-201ENST00000320578 LSM2Q9Y333 95 aaKnown RBP16.26■□□□□ 0.19
RAB39A-201ENST00000320578 ANKUB1A6NFN9 424 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 ARPC3O15145 178 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 IFNGP01579 166 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 TSPAN19P0C672 248 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 ITPKBP27987 946 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 POLR2HP52434 150 aaKnown RBP16.25■□□□□ 0.19
RAB39A-201ENST00000320578 EGR4Q05215 589 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 SPEM2Q0P670 501 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 NFATC3Q12968 1075 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 BTBD16Q32M84 506 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 TMEM81Q6P7N7 255 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 NDUFAF7Q7L592 441 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 GRINAQ7Z429 371 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 PIP4P1Q86T03 277 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 DND1Q8IYX4 353 aaKnown RBP16.25■□□□□ 0.19
RAB39A-201ENST00000320578 DUSP19Q8WTR2 217 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 TMEM234Q8WY98 164 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 ST8SIA1Q92185 356 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 SDHAF3Q9NRP4 125 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 TOR4AQ9NXH8 423 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 CHRNA9Q9UGM1 479 aa16.25■□□□□ 0.19
RAB39A-201ENST00000320578 IL20RAQ9UHF4 553 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms