RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 SLC38A4Q969I6 547 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 CPNE4Q96A23 557 aaPredicted RBP16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 ZFP3Q96NJ6 502 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 KLHDC3Q9BQ90 382 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 CADM1Q9BY67 442 aaKnown RBP16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 POTEKPQ9BYX7 375 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 MCTS1Q9ULC4 181 aaKnown RBP16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 TRAPPC4Q9Y296 219 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 FAM32AQ9Y421 112 aaKnown RBP16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 SVILO95425 2214 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 EIF1AYO14602 144 aaKnown RBP16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 SEC14L5O43304 696 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 WISP1O95388 367 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 STARP49675 285 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 HOXC5Q00444 222 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 TMEM176BQ3YBM2 270 aaPredicted RBP16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 ACSF3Q4G176 576 aaPredicted RBP16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 NSUN5P2Q63ZY6 315 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 HBMQ6B0K9 141 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 DEF8Q6ZN54 512 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 ASRGL1Q7L266 308 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 VTCN1Q7Z7D3 282 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 UBQLNLQ8IYU4 475 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 OR5M9Q8NGP3 310 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 ZHX1-C8orf76Q96EF9 292 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 ADGRG7Q96K78 797 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 PRRC1Q96M27 445 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 EPYCQ99645 322 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 TM9SF2Q99805 663 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 SLC19A3Q9BZV2 496 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 MAGIXQ9H6Y5 334 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 ALKBH4Q9NXW9 302 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 TINAGQ9UJW2 476 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 SLC5A6Q9Y289 635 aa16.11■□□□□ 0.17
SSSCA1-201ENST00000309328 ZNF407Q9C0G0 2248 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 A0A087WUJ7 227 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 HTR3EA5X5Y0 456 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 PRKD3O94806 890 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 SYNGR4O95473 234 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 PMS2P2O95744 297 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 UMPSP11172 480 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 SFTPDP35247 375 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 MSX2P35548 267 aaPredicted RBP16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 EIF1AXP47813 144 aaKnown RBP16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 CLDN20P56880 219 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 CARD18P57730 90 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 RAC3P60763 192 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 SRYQ05066 204 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 ST3GAL3Q11203 375 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 FLOT2Q14254 428 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 NPTX1Q15818 432 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 SGCBQ16585 318 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 EEF1A1P5Q5VTE0 462 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 GTF2IRD2BQ6EKJ0 949 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 OR2A2Q6IF42 318 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 POMZP3Q6PJE2 187 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 ADGRE4PQ86SQ3 457 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 GTF2IRD2Q86UP8 949 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 OR10D3Q8NH80 312 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 WNT2BQ93097 391 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 ZNF524Q96C55 264 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 CLPTM1LQ96KA5 538 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 NPAS1Q99742 590 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 TMEM43Q9BTV4 400 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 ANKRD19PQ9H560 264 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 TMEM185BQ9H7F4 350 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 TNFRSF10DQ9UBN6 386 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 MEMO1Q9Y316 297 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 ENPP4Q9Y6X5 453 aa16.1■□□□□ 0.17
SSSCA1-201ENST00000309328 DNAJC13O75165 2243 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 CPSF4LA6NMK7 179 aaKnown RBP16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 CCL21O00585 134 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 ACOT8O14734 319 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 OR2T1O43869 369 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 EFNA2O43921 213 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 TPST2O60704 377 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 EIF1BO60739 113 aaKnown RBP16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 CIB2O75838 187 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 TFPIP10646 304 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 RHCEP18577 417 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 TIMP3P35625 211 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 RBM34P42696 430 aaKnown RBP16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 OR1E2P47887 323 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 UQCRFS1P47985 274 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 CLDN15P56746 228 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 MFSD13AQ14CX5 517 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 CTU2Q2VPK5 515 aaKnown RBP16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 FAM98BQ52LJ0 330 aaKnown RBP16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 RPTNQ6XPR3 784 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 TMPPEQ6ZT21 453 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 OFCC1Q8IZS5 231 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 OR4D11Q8NGI4 311 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 OR6S1Q8NH40 331 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 HS6ST2Q96MM7 605 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 OR5B2Q96R09 309 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 ZNF347Q96SE7 839 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 TUBA1CQ9BQE3 449 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 IL1RAPQ9NPH3 570 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 SLC7A8Q9UHI5 535 aa16.09■□□□□ 0.17
SSSCA1-201ENST00000309328 POMPQ9Y244 141 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms