RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 KLK3P07288 261 aaPredicted RBP10.86□□□□□ -0.67
TRIM40-205ENST00000307859 SAGP10523 405 aaPredicted RBP10.86□□□□□ -0.67
TRIM40-205ENST00000307859 PNMTP11086 282 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 BMP7P18075 431 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 CCNA2P20248 432 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 GAS1P54826 345 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 NRG3P56975 720 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 SLC26A5P58743 744 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 CRYZQ08257 329 aaKnown RBP10.86□□□□□ -0.67
TRIM40-205ENST00000307859 FHL1Q13642 323 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 CTF1Q16619 201 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 AADACL4Q5VUY2 407 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 SMARCD3Q6STE5 483 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 ATG4DQ86TL0 474 aaPredicted RBP10.86□□□□□ -0.67
TRIM40-205ENST00000307859 AMER2Q8N7J2 671 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 ANKK1Q8NFD2 765 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 PMEPA1Q969W9 287 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 TMEM80Q96HE8 168 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 C12orf10Q9HB07 376 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 SLC39A1Q9NY26 324 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 TAS2R16Q9NYV7 291 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 GPR52Q9Y2T5 361 aa10.86□□□□□ -0.67
TRIM40-205ENST00000307859 IGKV1D-42A0A075B6H8 117 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 TRBV11-1A0A0K0K1C0 115 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 A0A1W2PPW3 197 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 IRGMA1A4Y4 181 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 ADAM10O14672 748 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 PPM1BO75688 479 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 NADKO95544 446 aaPredicted RBP10.85□□□□□ -0.67
TRIM40-205ENST00000307859 CH25HO95992 272 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 MST1P26927 711 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 EVI2BP34910 448 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 ZNF117Q03924 483 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 NFATC3Q12968 1075 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 EFR3AQ14156 821 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 TIGD6Q17RP2 521 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 THSD4Q6ZMP0 1018 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 P2RY8Q86VZ1 359 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 NAXDQ8IW45 347 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 TMCO5AQ8N6Q1 288 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 OR52I1Q8NGK6 324 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 PLEKHA8Q96JA3 519 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 CMKLR1Q99788 373 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 TMEM43Q9BTV4 400 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 ULBP3Q9BZM4 244 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 ENKD1Q9H0I2 346 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 FN3KQ9H479 309 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 MCCC2Q9HCC0 563 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 FGF20Q9NP95 211 aaPredicted RBP10.85□□□□□ -0.67
TRIM40-205ENST00000307859 IL20RAQ9UHF4 553 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 GPN3Q9UHW5 284 aaPredicted RBP10.85□□□□□ -0.67
TRIM40-205ENST00000307859 DIMT1Q9UNQ2 313 aaKnown RBP10.85□□□□□ -0.67
TRIM40-205ENST00000307859 BAIAP2Q9UQB8 552 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 NPFFR2Q9Y5X5 522 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 SDK2Q58EX2 2172 aa10.85□□□□□ -0.67
TRIM40-205ENST00000307859 TRAV27A0A087WT01 109 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 TMEM200CA6NKL6 621 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 ELOA3DA6NLF2 546 aaPredicted RBP10.84□□□□□ -0.67
TRIM40-205ENST00000307859 TMX2-CTNND1H3BSU7 103 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 NDUFB5O43674 189 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 CBFA2T3O75081 653 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 NAGAP17050 411 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 LIPAP38571 399 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 SLC9A3P48764 834 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 CCR4P51679 360 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 MLLT10P55197 1068 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 RAB40BQ12829 278 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 AQP6Q13520 282 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 ELOA3BQ3SY89 546 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 NXNL2Q5VZ03 156 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 PIP4P1Q86T03 277 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 OAFQ86UD1 273 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 MARCH3Q86UD3 253 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 LURAP1LQ8IV03 231 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 ELOA3Q8NG57 546 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 RNF138Q8WVD3 245 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 MR1Q95460 341 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 RFKQ969G6 155 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 ZNF524Q96C55 264 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 SGTBQ96EQ0 304 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 UBL7Q96S82 380 aaPredicted RBP10.84□□□□□ -0.67
TRIM40-205ENST00000307859 KLHDC3Q9BQ90 382 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 TBL1XR1Q9BZK7 514 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 CCDC86Q9H6F5 360 aaKnown RBP10.84□□□□□ -0.67
TRIM40-205ENST00000307859 HINT3Q9NQE9 182 aaKnown RBP10.84□□□□□ -0.67
TRIM40-205ENST00000307859 AKAP7Q9P0M2 348 aaPredicted RBP10.84□□□□□ -0.67
TRIM40-205ENST00000307859 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.84□□□□□ -0.67
TRIM40-205ENST00000307859 LSM2Q9Y333 95 aaKnown RBP10.84□□□□□ -0.67
TRIM40-205ENST00000307859 C9J4A7 227 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 HCRTR2O43614 444 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 ZNF354AO60765 605 aaPredicted RBP10.84□□□□□ -0.67
TRIM40-205ENST00000307859 SLC2A10O95528 541 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 RAB36O95755 333 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 UMODP07911 640 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 CD36P16671 472 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 SLC6A6P31641 620 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 SLC1A3P43003 542 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 MTNR1AP48039 350 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 CDH11P55287 796 aa10.84□□□□□ -0.67
TRIM40-205ENST00000307859 RAB15P59190 212 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms