RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 C1orf198Q9H425 327 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 KIAA1522Q9P206 1035 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-201ENST00000297405 RIPK3Q9Y572 518 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 NRCAMQ92823 1304 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 MEIS3P2A8K0S8 358 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 H3BQ06 376 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-201ENST00000297405 CDC123O75794 336 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-201ENST00000297405 CRYABP02511 175 aaKnown RBP4.56□□□□□ -1.68
CSMD3-201ENST00000297405 ADH4P08319 380 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 PIPP12273 146 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-201ENST00000297405 CPOXP36551 454 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 CLDN8P56748 225 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 CLEC9AQ6UXN8 241 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 MDGA2Q7Z553 956 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 SP8Q8IXZ3 490 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 MBD3L1Q8WWY6 194 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 ARV1Q9H2C2 271 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 CDH20Q9HBT6 801 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 PADI1Q9ULC6 663 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 V9GY05 133 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 A0A1W2PPM1 405 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 GLOD5A6NK44 160 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 M0R1X1 148 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 LGI1O95970 557 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 PRNPP04156 253 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 ALPLP05186 524 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF30P17039 623 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 CRABP1P29762 137 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 PRDX3P30048 256 aaKnown RBP4.56□□□□□ -1.68
CSMD3-201ENST00000297405 ASCL1P50553 236 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 APOOLQ6UXV4 268 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 RNF180Q86T96 592 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 OR1S1Q8NH92 325 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 PSAT1Q9Y617 370 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 BCORQ6W2J9 1755 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 CACNG3O60359 315 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 YIF1AO95070 293 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 CPNE6O95741 557 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 CHRM2P08172 466 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 SERTAD2Q14140 314 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 PLEKHS1Q5SXH7 462 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 OR2T2Q6IF00 324 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 ERN2Q76MJ5 926 aaKnown RBP4.56□□□□□ -1.68
CSMD3-201ENST00000297405 OR4K13Q8NH42 304 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 LMX1AQ8TE12 382 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 POP1Q99575 1024 aaKnown RBP4.56□□□□□ -1.68
CSMD3-201ENST00000297405 CAPN10Q9HC96 672 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 CD163L1Q9NR16 1453 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 NPEPPSL1A6NEC2 478 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 ARRDC5A6NEK1 342 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF98A6NK75 572 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 CT45A10P0DMU9 189 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 ADRA2CP18825 462 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 AKT2P31751 481 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 CCR9P51686 369 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 NKX2-5P52952 324 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-201ENST00000297405 SNRPD2P62316 118 aaKnown RBP4.56□□□□□ -1.68
CSMD3-201ENST00000297405 CLEC6AQ6EIG7 209 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 EEPD1Q7L9B9 569 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 ISCA1Q9BUE6 129 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF426Q9BUY5 554 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 RIMBP3CA6NJZ7 1639 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 RIMBP3BA6NNM3 1639 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 RIMBP3Q9UFD9 1639 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 C17orf102A2RUQ5 167 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 LIPFP07098 398 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 STSP08842 583 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF44P15621 663 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 NTF3P20783 257 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 ADRA1BP35368 520 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 RHBDL3P58872 404 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 MICAQ29983 383 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 GFOD2Q3B7J2 385 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 OR5D16Q8NGK9 328 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 MIB2Q96AX9 1013 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 ACY3Q96HD9 319 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 JAM3Q9BX67 310 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 GPR61Q9BZJ8 451 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 DNAJC27Q9NZQ0 273 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-201ENST00000297405 PPP1R3CQ9UQK1 317 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 DCCP43146 1447 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 TMEM150CB9EJG8 249 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 SLC37A4O43826 429 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 ACPPP15309 386 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 NAA10P41227 235 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-201ENST00000297405 KCNQ1P51787 676 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 FAM3BP58499 235 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-201ENST00000297405 RPL7AP62424 266 aaKnown RBP4.56□□□□□ -1.68
CSMD3-201ENST00000297405 GLYR1Q49A26 553 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-201ENST00000297405 CLEC12AQ5QGZ9 265 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 SAPCD1Q5SSQ6 148 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 GOLGA7Q7Z5G4 137 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 NRMQ8IXM6 262 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 EXD3Q8N9H8 876 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 GPR174Q9BXC1 333 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 BRINP2Q9C0B6 783 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 SPACA1Q9HBV2 294 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 C19orf25Q9UFG5 118 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-201ENST00000297405 ZDHHC8Q9ULC8 765 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms