RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 ZNF354AO60765 605 aaPredicted RBP19.53■□□□□ 0.72
SOX17-201ENST00000297316 PTP4A3O75365 173 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 ABCD3P28288 659 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 BCAP31P51572 246 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 RNF4P78317 190 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 PLCXD2Q0VAA5 305 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 KLHL22Q53GT1 634 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 C3orf38Q5JPI3 329 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 OMA1Q96E52 524 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 TRMT61AQ96FX7 289 aaKnown RBP19.53■□□□□ 0.72
SOX17-201ENST00000297316 VMP1Q96GC9 406 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 HCAR1Q9BXC0 346 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 AKIP1Q9NQ31 210 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 MED17Q9NVC6 651 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 SLC39A1Q9NY26 324 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 TMEM5Q9Y2B1 443 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 ZC3H12DA2A288 527 aaKnown RBP19.53■□□□□ 0.72
SOX17-201ENST00000297316 SAGE2PA6NJ88 616 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 IL12BP29460 328 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 CRYZQ08257 329 aaKnown RBP19.53■□□□□ 0.72
SOX17-201ENST00000297316 FCRLBQ6BAA4 426 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 NAXDQ8IW45 347 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 CMIPQ8IY22 773 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 MR1Q95460 341 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 B3GALT1Q9Y5Z6 326 aa19.53■□□□□ 0.72
SOX17-201ENST00000297316 CLDN25C9JDP6 229 aa19.52■□□□□ 0.72
SOX17-201ENST00000297316 LRRN3E7EW58 273 aa19.52■□□□□ 0.72
SOX17-201ENST00000297316 SCDO00767 359 aa19.52■□□□□ 0.72
SOX17-201ENST00000297316 TSPAN2O60636 221 aa19.52■□□□□ 0.72
SOX17-201ENST00000297316 HMGN1P05114 100 aa19.52■□□□□ 0.72
SOX17-201ENST00000297316 CCR4P51679 360 aa19.52■□□□□ 0.72
SOX17-201ENST00000297316 DCAF7P61962 342 aa19.52■□□□□ 0.72
SOX17-201ENST00000297316 PLBD1Q6P4A8 553 aa19.52■□□□□ 0.72
SOX17-201ENST00000297316 BPHLQ86WA6 291 aaPredicted RBP19.52■□□□□ 0.72
SOX17-201ENST00000297316 CDK20Q8IZL9 346 aa19.52■□□□□ 0.72
SOX17-201ENST00000297316 OR52L1Q8NGH7 329 aa19.52■□□□□ 0.72
SOX17-201ENST00000297316 OR6Q1Q8NGQ2 317 aa19.52■□□□□ 0.72
SOX17-201ENST00000297316 SLC35B4Q969S0 331 aa19.52■□□□□ 0.72
SOX17-201ENST00000297316 OTULINQ96BN8 352 aa19.52■□□□□ 0.72
SOX17-201ENST00000297316 TNFRSF13CQ96RJ3 184 aa19.52■□□□□ 0.72
SOX17-201ENST00000297316 FBXO8Q9NRD0 319 aa19.52■□□□□ 0.72
SOX17-201ENST00000297316 EXPH5Q8NEV8 1989 aa19.52■□□□□ 0.71
SOX17-201ENST00000297316 LRRTM2O43300 516 aa19.52■□□□□ 0.71
SOX17-201ENST00000297316 LIMS3P0CW19 117 aa19.52■□□□□ 0.71
SOX17-201ENST00000297316 LIMS4P0CW20 117 aa19.52■□□□□ 0.71
SOX17-201ENST00000297316 SPEM2Q0P670 501 aa19.52■□□□□ 0.71
SOX17-201ENST00000297316 NXNL2Q5VZ03 156 aa19.52■□□□□ 0.71
SOX17-201ENST00000297316 ULK3Q6PHR2 472 aa19.52■□□□□ 0.71
SOX17-201ENST00000297316 USP43Q70EL4 1123 aa19.52■□□□□ 0.71
SOX17-201ENST00000297316 CXXC5Q7LFL8 322 aaKnown RBP19.52■□□□□ 0.71
SOX17-201ENST00000297316 LNX2Q8N448 690 aa19.52■□□□□ 0.71
SOX17-201ENST00000297316 FAM71CQ8NEG0 241 aa19.52■□□□□ 0.71
SOX17-201ENST00000297316 TM9SF4Q92544 642 aa19.52■□□□□ 0.71
SOX17-201ENST00000297316 TEX12Q9BXU0 123 aa19.52■□□□□ 0.71
SOX17-201ENST00000297316 SLC26A1Q9H2B4 701 aa19.52■□□□□ 0.71
SOX17-201ENST00000297316 MCCC2Q9HCC0 563 aa19.52■□□□□ 0.71
SOX17-201ENST00000297316 UBL4AP11441 157 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 BMP7P18075 431 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 RBM34P42696 430 aaKnown RBP19.51■□□□□ 0.71
SOX17-201ENST00000297316 SERPINB10P48595 397 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 SKP2Q13309 424 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 ZNF846Q147U1 533 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 LIPKQ5VXJ0 399 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 CPEB2Q7Z5Q1 589 aaKnown RBP19.51■□□□□ 0.71
SOX17-201ENST00000297316 MARCH3Q86UD3 253 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 ZNF527Q8NB42 609 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 GALNT6Q8NCL4 622 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 C7orf57Q8NEG2 295 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 OR5M3Q8NGP4 307 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 IFT27Q9BW83 186 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 SEMA4CQ9C0C4 833 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 SLC35A3Q9Y2D2 325 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 OR6C76A6NM76 312 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 SNTNA6NMZ2 147 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 TO15178 435 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 RCBTB2O95199 551 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 MLLT11Q13015 90 aaPredicted RBP19.51■□□□□ 0.71
SOX17-201ENST00000297316 FAM198BQ6UWH4 519 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 LHFPL3Q86UP9 236 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 C3orf49Q96BT1 292 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 EDEM2Q9BV94 578 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 HOXD1Q9GZZ0 328 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 RPS6KB2Q9UBS0 482 aa19.51■□□□□ 0.71
SOX17-201ENST00000297316 METTL15A6NJ78 407 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 GTPBP1O00178 669 aaKnown RBP19.5■□□□□ 0.71
SOX17-201ENST00000297316 ZNF806P0C7X5 589 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 BMP4P12644 408 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 MYL12AP19105 171 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 ENDOUP21128 410 aaKnown RBP19.5■□□□□ 0.71
SOX17-201ENST00000297316 HTR1FP30939 366 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 FOXK2Q01167 660 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 ZNF362Q5T0B9 420 aaPredicted RBP19.5■□□□□ 0.71
SOX17-201ENST00000297316 OAFQ86UD1 273 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 PHC2Q8IXK0 858 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 MFSD4AQ8N468 514 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 SIRT6Q8N6T7 355 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 LRRC17Q8N6Y2 441 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 GATAD2BQ8WXI9 593 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 CMKLR1Q99788 373 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 ZNF649Q9BS31 505 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms