RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ANKRD33Q7Z3H0 272 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 SIMC1Q8NDZ2 872 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 OR4F15Q8NGB8 312 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 SLC46A1Q96NT5 459 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 R3HDMLQ9H3Y0 253 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 EGLN3Q9H6Z9 239 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 DDX60LQ5H9U9 1706 aaKnown RBP11.92□□□□□ -0.5
PTCD1-201ENST00000292478 ANKRD30BLA7E2S9 258 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 CAMLGP49069 296 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 AKR1C2P52895 323 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 AGAP6Q5VW22 663 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 ABHD17CQ6PCB6 329 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 ASB12Q8WXK4 309 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 ZNF582Q96NG8 517 aaPredicted RBP11.92□□□□□ -0.5
PTCD1-201ENST00000292478 AGAP4Q96P64 663 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 WDR83Q9BRX9 315 aaKnown RBP11.92□□□□□ -0.5
PTCD1-201ENST00000292478 SLC25A18Q9H1K4 315 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 GLIPR2Q9H4G4 154 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 PDFQ9HBH1 243 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 LYRM4Q9HD34 91 aa11.92□□□□□ -0.5
PTCD1-201ENST00000292478 NXT1Q9UKK6 140 aaKnown RBP11.92□□□□□ -0.5
PTCD1-201ENST00000292478 MEIOCA2RUB1 952 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 F5H5K5 113 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 H3BQ06 376 aaPredicted RBP11.91□□□□□ -0.5
PTCD1-201ENST00000292478 ELAVL4P26378 380 aaKnown RBP11.91□□□□□ -0.5
PTCD1-201ENST00000292478 SLC1A3P43003 542 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 MTNR1BP49286 362 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 SRYQ05066 204 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 GPR19Q15760 415 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 ZNF77Q15935 545 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.91□□□□□ -0.5
PTCD1-201ENST00000292478 NUMBLQ9Y6R0 609 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 COL18A1P39060 1754 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 TVP23AA6NH52 213 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 BCAT2O15382 392 aaPredicted RBP11.91□□□□□ -0.5
PTCD1-201ENST00000292478 POU3F2P20265 443 aaPredicted RBP11.91□□□□□ -0.5
PTCD1-201ENST00000292478 MAOAP21397 527 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 DPTQ07507 201 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 TMEM207Q6UWW9 146 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 TMEM64Q6YI46 380 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 LINC00299Q6ZSB3 139 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 OR5L1Q8NGL2 311 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 COQ10AQ96MF6 247 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 ELOVL3Q9HB03 270 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 CXorf51AA0A1B0GTR3 108 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 TMEM269A0A1B0GVZ9 245 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 ARHGAP33O14559 1287 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 ARPC1BO15143 372 aaKnown RBP11.91□□□□□ -0.5
PTCD1-201ENST00000292478 SEC14L2O76054 403 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 HTR1FP30939 366 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 DLX5P56178 289 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 TGFBR3Q03167 851 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 ECH1Q13011 328 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 ACTBL2Q562R1 376 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 SLX4IPQ5VYV7 408 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 HBMQ6B0K9 141 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 CFAP77Q6ZQR2 320 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 SLC46A3Q7Z3Q1 461 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 MMP21Q8N119 569 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 OR13C2Q8NGS9 318 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 MAFIPQ8WZ33 124 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 SLC41A2Q96JW4 573 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 STACQ99469 402 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 NPAP1Q9NZP6 1156 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 A0A1W2PQ09 198 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 FAM227AF5H4B4 570 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 SLC5A2P31639 672 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 UQCRC1P31930 480 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 SNRPGP62308 76 aaKnown RBP11.91□□□□□ -0.5
PTCD1-201ENST00000292478 GPR176Q14439 515 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 METRNLQ641Q3 311 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 CYP4V2Q6ZWL3 525 aaPredicted RBP11.91□□□□□ -0.5
PTCD1-201ENST00000292478 RCBTB1Q8NDN9 531 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 RNF128Q8TEB7 428 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 SULT4A1Q9BR01 284 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 TUBB1Q9H4B7 451 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 MAN2C1Q9NTJ4 1040 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 USP22Q9UPT9 525 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 A3GALT2U3KPV4 340 aa11.91□□□□□ -0.5
PTCD1-201ENST00000292478 GFYI3L273 518 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 CTNSO60931 367 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 SMN1Q16637 294 aaKnown RBP11.9□□□□□ -0.5
PTCD1-201ENST00000292478 OTUD1Q5VV17 481 aaPredicted RBP11.9□□□□□ -0.5
PTCD1-201ENST00000292478 NIPAL3Q6P499 406 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 DPY19L2P2Q6ZN68 376 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 ZNF695Q8IW36 515 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 ZFAND1Q8TCF1 268 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 DUS3LQ96G46 650 aaKnown RBP11.9□□□□□ -0.5
PTCD1-201ENST00000292478 C16orf58Q96GQ5 468 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 RPH3AQ9Y2J0 694 aaPredicted RBP11.9□□□□□ -0.5
PTCD1-201ENST00000292478 TRAV36DV7A0A075B6V5 113 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 NSG1A0A0A6YYJ2 146 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 FBXO45P0C2W1 286 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 MTHFD2P13995 350 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 MAOBP27338 520 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 ARL3P36405 182 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 NR4A2P43354 598 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 ALDH3B2P48448 385 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 ATP1B3P54709 279 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 LTBQ06643 244 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms