RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 CRNNQ9UBG3 495 aaPredicted RBP17.68■□□□□ 0.42
BRAF-201ENST00000288602 SLC35A3Q9Y2D2 325 aa17.68■□□□□ 0.42
BRAF-201ENST00000288602 SIRT4Q9Y6E7 314 aaPredicted RBP17.68■□□□□ 0.42
BRAF-201ENST00000288602 PI4KAP42356 2102 aa17.68■□□□□ 0.42
BRAF-201ENST00000288602 A0A087WUJ7 227 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 LOC110117498-PIK3R3F6TDL0 507 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 HIST1H1CP16403 213 aaKnown RBP17.67■□□□□ 0.42
BRAF-201ENST00000288602 PSMD4P55036 377 aaKnown RBP17.67■□□□□ 0.42
BRAF-201ENST00000288602 RUNX1T1Q06455 604 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 ZNF721Q8TF20 911 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 DNAJA3Q96EY1 480 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 NUDT9Q9BW91 350 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 ISYNA1Q9NPH2 558 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 MKKSQ9NPJ1 570 aaPredicted RBP17.67■□□□□ 0.42
BRAF-201ENST00000288602 PLEKHB1Q9UF11 243 aaPredicted RBP17.67■□□□□ 0.42
BRAF-201ENST00000288602 CACNA1EQ15878 2313 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 IGKV3D-11A0A0A0MRZ8 115 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 C2orf92A0A1B0GVN3 265 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 DAPL1A0PJW8 107 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 EFCAB7A8K855 629 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 POLR1CO15160 346 aaPredicted RBP17.67■□□□□ 0.42
BRAF-201ENST00000288602 AKAP8O43823 692 aaKnown RBP17.67■□□□□ 0.42
BRAF-201ENST00000288602 DDAH2O95865 285 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 PEPDP12955 493 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 ZNF3P17036 446 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 FBLP22087 321 aaKnown RBP17.67■□□□□ 0.42
BRAF-201ENST00000288602 CD300CQ08708 224 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 ATP6V1C2Q8NEY4 427 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 CCDC74AQ96AQ1 378 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 KATNB1Q9BVA0 655 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 UBQLN4Q9NRR5 601 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 FGF21Q9NSA1 209 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 MKL2Q9ULH7 1088 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 IER3IP1Q9Y5U9 82 aa17.67■□□□□ 0.42
BRAF-201ENST00000288602 SHISA3A0PJX4 238 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 NCR1O76036 304 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 HK1P19367 917 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 SLC6A6P31641 620 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 RORAP35398 523 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 PPICP45877 212 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 DHPSP49366 369 aaPredicted RBP17.66■□□□□ 0.42
BRAF-201ENST00000288602 ZNF181Q2M3W8 571 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 ARHGAP40Q5TG30 622 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 CMIPQ8IY22 773 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 OR7G1Q8NGA0 311 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 OR52N1Q8NH53 320 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 SGTBQ96EQ0 304 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 MESP1Q9BRJ9 268 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 PELOQ9BRX2 385 aaKnown RBP17.66■□□□□ 0.42
BRAF-201ENST00000288602 SAGE2PA6NJ88 616 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 SERPINI2O75830 405 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 UTS2O95399 124 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 IL1AP01583 271 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 IGKV3-11P04433 115 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 AZGP1P25311 298 aaKnown RBP17.66■□□□□ 0.42
BRAF-201ENST00000288602 GALNSP34059 522 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 RPL4P36578 427 aaKnown RBP17.66■□□□□ 0.42
BRAF-201ENST00000288602 LANCL3Q6ZV70 420 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 RFLNBQ8N5W9 214 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 FAM98AQ8NCA5 519 aaKnown RBP17.66■□□□□ 0.42
BRAF-201ENST00000288602 OR1F2PQ96R84 312 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 ELF4Q99607 663 aaPredicted RBP17.66■□□□□ 0.42
BRAF-201ENST00000288602 ABCB9Q9NP78 766 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 CTSFQ9UBX1 484 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 MMACHCQ9Y4U1 282 aa17.66■□□□□ 0.42
BRAF-201ENST00000288602 ASCC3Q8N3C0 2202 aaKnown RBP17.66■□□□□ 0.42
BRAF-201ENST00000288602 SLC35F4A4IF30 521 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 E9PI62 339 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 GABRPO00591 440 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 SCDO00767 359 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 ICOSLGO75144 302 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 UBL4AP11441 157 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 SLC2A5P22732 501 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 GPR143P51810 404 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 PSPHP78330 225 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 C9orf40Q8IXQ3 194 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 ARIH2OSQ8N7S6 290 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 ADIPOR1Q96A54 375 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 ZNF501Q96CX3 271 aaPredicted RBP17.65■□□□□ 0.42
BRAF-201ENST00000288602 LCORQ96JN0 433 aaPredicted RBP17.65■□□□□ 0.42
BRAF-201ENST00000288602 SLC41A2Q96JW4 573 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 SLC46A1Q96NT5 459 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 EVA1AQ9H8M9 152 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 ADGRL4Q9HBW9 690 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 KLHL1Q9NR64 748 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 SERTAD3Q9UJW9 196 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 CPED1A4D0V7 1026 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 SLC22A31A6NKX4 558 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 GTPBP1O00178 669 aaKnown RBP17.65■□□□□ 0.42
BRAF-201ENST00000288602 MAGEB4O15481 346 aaPredicted RBP17.65■□□□□ 0.42
BRAF-201ENST00000288602 IL33O95760 270 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 SPNP16150 400 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 ETV6P41212 452 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 NR0B1P51843 470 aaKnown RBP17.65■□□□□ 0.42
BRAF-201ENST00000288602 FNDC7Q5VTL7 733 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 CD200R1LQ6Q8B3 271 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 MARCH9Q86YJ5 346 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 ZNRF4Q8WWF5 429 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 ZMYND19Q96E35 227 aaPredicted RBP17.65■□□□□ 0.42
BRAF-201ENST00000288602 NEURL2Q9BR09 285 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms