RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 RERGQ96A58 199 aaPredicted RBP12.43□□□□□ -0.42
SCAF4-201ENST00000286835 SEMA4CQ9C0C4 833 aa12.43□□□□□ -0.42
SCAF4-201ENST00000286835 ZNF436Q9C0F3 470 aaPredicted RBP12.43□□□□□ -0.42
SCAF4-201ENST00000286835 SRA1Q9HD15 236 aaKnown RBP12.43□□□□□ -0.42
SCAF4-201ENST00000286835 C20orf141Q9NUB4 165 aa12.43□□□□□ -0.42
SCAF4-201ENST00000286835 B3GALT2O43825 422 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 MNDAP41218 407 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 REEP5Q00765 189 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 ZNHIT3Q15649 155 aaPredicted RBP12.42□□□□□ -0.42
SCAF4-201ENST00000286835 ZNF542PQ5EBM4 170 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 ELP2Q6IA86 826 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 NIPAL3Q6P499 406 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 OR2L5Q8NG80 312 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 OR52E1Q8NGJ3 308 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 ADAD1Q96M93 576 aaKnown RBP12.42□□□□□ -0.42
SCAF4-201ENST00000286835 ACTR6Q9GZN1 396 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 PCYT1BQ9Y5K3 369 aaPredicted RBP12.42□□□□□ -0.42
SCAF4-201ENST00000286835 TRPM6Q9BX84 2022 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 FNDC1Q4ZHG4 1894 aaPredicted RBP12.42□□□□□ -0.42
SCAF4-201ENST00000286835 IFNA16P05015 189 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 PGDP52209 483 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 DUSP2Q05923 314 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 C19orf57Q0VDD7 668 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 AANATQ16613 207 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 ZNF687Q8N1G0 1237 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 MYEF2Q9P2K5 600 aaKnown RBP12.42□□□□□ -0.42
SCAF4-201ENST00000286835 KLK11Q9UBX7 282 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 NAT1P18440 290 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 PSMB1P20618 241 aaKnown RBP12.42□□□□□ -0.42
SCAF4-201ENST00000286835 SLC6A6P31641 620 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 PSMD4P55036 377 aaKnown RBP12.42□□□□□ -0.42
SCAF4-201ENST00000286835 DECR1Q16698 335 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 TMEM35AQ53FP2 167 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 ALG10BQ5I7T1 473 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 POGLUT1Q8NBL1 392 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 OR52I2Q8NH67 350 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 CCDC86Q9H6F5 360 aaKnown RBP12.42□□□□□ -0.42
SCAF4-201ENST00000286835 KLHL9Q9P2J3 617 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 GPR34Q9UPC5 381 aa12.42□□□□□ -0.42
SCAF4-201ENST00000286835 MRPS17Q9Y2R5 130 aaKnown RBP12.42□□□□□ -0.42
SCAF4-201ENST00000286835 NCOR1O75376 2440 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 GBF1Q92538 1859 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 ZNF593O00488 134 aaPredicted RBP12.41□□□□□ -0.42
SCAF4-201ENST00000286835 HPXP02790 462 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 TPOP07202 933 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 SBK2P0C263 348 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 PRKACAP17612 351 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 ATF1P18846 271 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 FAUP35544 74 aaKnown RBP12.41□□□□□ -0.42
SCAF4-201ENST00000286835 HTR4Q13639 388 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 FGL2Q14314 439 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 CST6Q15828 149 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 JAZF1Q86VZ6 243 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 EXO5Q9H790 373 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 ISYNA1Q9NPH2 558 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 NOX4Q9NPH5 578 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 GDE1Q9NZC3 331 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 C17orf113A0A1B0GUU1 675 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 PRRT4C9JH25 899 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 OLFM2O95897 454 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 POLR2CP19387 275 aaPredicted RBP12.41□□□□□ -0.42
SCAF4-201ENST00000286835 RAD52P43351 418 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 PTH2RP49190 550 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 GPNMBQ14956 572 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 DUSP5Q16690 384 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 AMZ1Q400G9 498 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 SCGB2B2Q4G0G5 96 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 TRMT12Q53H54 448 aaKnown RBP12.41□□□□□ -0.42
SCAF4-201ENST00000286835 ABHD17CQ6PCB6 329 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 ZNF836Q6ZNA1 936 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 SYNPRQ8TBG9 265 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 DIO2Q92813 273 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 MOAP1Q96BY2 351 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 KCTD12Q96CX2 325 aaKnown RBP12.41□□□□□ -0.42
SCAF4-201ENST00000286835 ENKD1Q9H0I2 346 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 LAMA3Q16787 3333 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 ITGA10O75578 1167 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 MAKP20794 623 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 ZNF10P21506 573 aaPredicted RBP12.41□□□□□ -0.42
SCAF4-201ENST00000286835 TMEM31Q5JXX7 168 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 THEM6Q8WUY1 208 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 CNN2Q99439 309 aaKnown RBP12.41□□□□□ -0.42
SCAF4-201ENST00000286835 TMEM168Q9H0V1 697 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 RSPH9Q9H1X1 276 aaPredicted RBP12.41□□□□□ -0.42
SCAF4-201ENST00000286835 SPHK1Q9NYA1 384 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 IL20Q9NYY1 176 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 COMMD9Q9P000 198 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 FBXL3Q9UKT7 428 aa12.41□□□□□ -0.42
SCAF4-201ENST00000286835 TEX51A0A1B0GUA7 166 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 GOSR2O14653 212 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 LIPCP11150 499 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 AKT2P31751 481 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 NUDT1P36639 197 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 SELENOPP49908 381 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 HNRNPA1L2Q32P51 320 aaKnown RBP12.4□□□□□ -0.42
SCAF4-201ENST00000286835 LGALSLQ3ZCW2 172 aaPredicted RBP12.4□□□□□ -0.42
SCAF4-201ENST00000286835 METTL11BQ5VVY1 283 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 ZNF627Q7L945 461 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 C12orf40Q86WS4 652 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 OR7G2Q8NG99 324 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms