RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 BIN3Q9NQY0 253 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 OR14J1Q9UGF5 321 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 MOKQ9UQ07 419 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 HS3ST2Q9Y278 367 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 FAM96BQ9Y3D0 163 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 PCNX1Q96RV3 2341 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 CCDC168Q8NDH2 2452 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 TRBV11-1A0A0K0K1C0 115 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 SLC9B1P1A6NJY1 282 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 SNAPINO95295 136 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 MT-ATP6P00846 226 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 EDN1P05305 212 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 SERPINA7P05543 415 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF888P0CJ79 500 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 ACP2P11117 423 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 BMP2P12643 396 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 OPRD1P41143 372 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 BMXP51813 675 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 SEC61A1P61619 476 aaKnown RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 OR7A5Q15622 319 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 HMGN3Q15651 99 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 PPP1R3AQ16821 1122 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 UBE2UQ5VVX9 321 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 SBSNQ6UWP8 590 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 C15orf39Q6ZRI6 1047 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 C15orf54Q8N8G6 183 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 MFSD9Q8NBP5 474 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 NLGN4YQ8NFZ3 816 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 TCTEX1D2Q8WW35 142 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 FAM71F1Q96KD3 344 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 ATF6BQ99941 703 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 FGF21Q9NSA1 209 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 CNOT2Q9NZN8 540 aaKnown RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 TAAR2Q9P1P5 351 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 NUBP2Q9Y5Y2 271 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 CADP27708 2225 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 WASH4PA8MWX3 477 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 ZBTB22O15209 634 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 LYRM1O43325 122 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 DENRO43583 198 aaKnown RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 DIRAS1O95057 198 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 HBE1P02100 147 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 CDK1P06493 297 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 DEFA4P12838 97 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 CD53P19397 219 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 SLC2A5P22732 501 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 PRKAR1BP31321 381 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 LSSP48449 732 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 IKZF1Q13422 519 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 P2RY14Q15391 338 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 CDKN3Q16667 212 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 TBC1D28Q2M2D7 210 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 PLAG1Q6DJT9 500 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 SLC35G3Q8N808 338 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 OR7G1Q8NGA0 311 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 OR1E3Q8WZA6 343 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 RBMXL1Q96E39 390 aaKnown RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 LRFN5Q96NI6 719 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 BARHL1Q9BZE3 327 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 CPNE5Q9HCH3 593 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 ISYNA1Q9NPH2 558 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 C1GALT1Q9NS00 363 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 OLAHQ9NV23 265 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 SLC17A6Q9P2U8 582 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 RASD1Q9Y272 281 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 LSM5Q9Y4Y9 91 aaKnown RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 DNAJC15Q9Y5T4 150 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 KNDC1Q76NI1 1749 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 CCDC163A0A0D9SF12 145 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 A0A1B0GX78 115 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 F5H5P2 479 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 SYT5O00445 386 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 HMGN2P05204 90 aaKnown RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 SLC2A1P11166 492 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 HTR5AP47898 357 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 FXYD4P59646 89 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 NPY5RQ15761 445 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 TBRG1Q3YBR2 411 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 ZDHHC24Q6UX98 284 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 ADAMTSL4Q6UY14 1074 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 NAA40Q86UY6 237 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 MFSD6LQ8IWD5 586 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 OR5K2Q8NHB8 316 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 NPRL2Q8WTW4 380 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF300Q96RE9 604 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 GINS3Q9BRX5 216 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 IKZF4Q9H2S9 585 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 SEMA6CQ9H3T2 930 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 MAN2C1Q9NTJ4 1040 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 INTS6Q9UL03 887 aaKnown RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 USP22Q9UPT9 525 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 SSUH2Q9Y2M2 353 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 KLF13Q9Y2Y9 288 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 CRYM-AS1A6NIL9 109 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 CXorf49A8MYA2 514 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 RPS17P08708 135 aaKnown RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF728P0DKX0 622 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 HOXA1P49639 335 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 INHBCP55103 352 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 LCN6P62502 163 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms