RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 CLEC1AQ8NC01 280 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 CCNL2Q96S94 520 aaPredicted RBP8.21□□□□□ -1.1
NIPBL-201ENST00000282516 CLSTN3Q9BQT9 956 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 TGIF2Q9GZN2 237 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 OR51B6Q9H340 312 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 SFXN1Q9H9B4 322 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 ZMAT5Q9UDW3 170 aaKnown RBP8.21□□□□□ -1.1
NIPBL-201ENST00000282516 GIMAP2Q9UG22 337 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 CBY1Q9Y3M2 126 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 YTHDF2Q9Y5A9 579 aaKnown RBP8.21□□□□□ -1.1
NIPBL-201ENST00000282516 TMEM82A0PJX8 343 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 CRYM-AS1A6NIL9 109 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 ITGAMP11215 1152 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF836Q6ZNA1 936 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 C19orf35Q6ZS72 473 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 CNEP1R1Q8N9A8 125 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 ARV1Q9H2C2 271 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 PLIN4Q96Q06 1357 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 TMEM212A6NML5 194 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 FOXE1O00358 373 aaPredicted RBP8.2□□□□□ -1.1
NIPBL-201ENST00000282516 HPGDSO60760 199 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 FDXRP22570 491 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 CXADRP78310 365 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 NADSYN1Q6IA69 706 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 RPS27LQ71UM5 84 aaKnown RBP8.2□□□□□ -1.1
NIPBL-201ENST00000282516 DCLRE1CQ96SD1 692 aaKnown RBP8.2□□□□□ -1.1
NIPBL-201ENST00000282516 SOX17Q9H6I2 414 aaPredicted RBP8.2□□□□□ -1.1
NIPBL-201ENST00000282516 A0A087WZY1 265 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 A0A0G2JLL6 359 aaPredicted RBP8.2□□□□□ -1.1
NIPBL-201ENST00000282516 AADACP22760 399 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 XCR1P46094 333 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 RAB7AP51149 207 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 PRRT2Q7Z6L0 340 aaPredicted RBP8.2□□□□□ -1.1
NIPBL-201ENST00000282516 C4orf32Q8N8J7 132 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 TANKQ92844 425 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 GPR174Q9BXC1 333 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 VSX1Q9NZR4 365 aaPredicted RBP8.2□□□□□ -1.1
NIPBL-201ENST00000282516 TERTO14746 1132 aaKnown RBP8.2□□□□□ -1.1
NIPBL-201ENST00000282516 FBXO24O75426 580 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 VIPR2P41587 438 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 UBE2G1P62253 170 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 LTBQ06643 244 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 MRPL10Q7Z7H8 261 aaKnown RBP8.2□□□□□ -1.1
NIPBL-201ENST00000282516 HMGN2P46Q86SG4 172 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 CATSPERDQ86XM0 798 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 B3GNT7Q8NFL0 401 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 SERINC2Q96SA4 455 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 ZCCHC4Q9H5U6 513 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 HEMK1Q9Y5R4 338 aaPredicted RBP8.2□□□□□ -1.1
NIPBL-201ENST00000282516 ARHGAP33O14559 1287 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 SCO1O75880 301 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 TMEM11P17152 192 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 OPRL1P41146 370 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 EIF2DP41214 584 aaKnown RBP8.2□□□□□ -1.1
NIPBL-201ENST00000282516 IKZF1Q13422 519 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 LY6G5CQ5SRR4 150 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF684Q5T5D7 378 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 RNF32Q9H0A6 362 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 PRAMEF27A3QJZ7 478 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 DTYMKP23919 212 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 DGKZQ13574 1117 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 TECRLQ5HYJ1 363 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 PRAMEF9Q5VWM5 478 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 COMMD6Q7Z4G1 85 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 DPPA2Q7Z7J5 298 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 REEP6Q96HR9 211 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 GAR1Q9NY12 217 aaKnown RBP8.2□□□□□ -1.1
NIPBL-201ENST00000282516 IER3IP1Q9Y5U9 82 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 V9GY05 133 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 SCN2AQ99250 2005 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 PHRF1Q9P1Y6 1649 aaKnown RBP8.2□□□□□ -1.1
NIPBL-201ENST00000282516 MEIOCA2RUB1 952 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 SDHDO14521 159 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 NSA2O95478 260 aaKnown RBP8.2□□□□□ -1.1
NIPBL-201ENST00000282516 SUB1P53999 127 aaKnown RBP eCLIP8.2□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF33BQ06732 778 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 SLC9A3R2Q15599 337 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 RPS26P11Q5JNZ5 115 aaPredicted RBP8.2□□□□□ -1.1
NIPBL-201ENST00000282516 OR51L1Q8NGJ5 315 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 C1orf74Q96LT6 269 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 F2RL3Q96RI0 385 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 METTL9Q9H1A3 318 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 ACKR4Q9NPB9 350 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 MTCH1Q9NZJ7 389 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 TRPM6Q9BX84 2022 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 RNF225M0QZC1 329 aaPredicted RBP8.2□□□□□ -1.1
NIPBL-201ENST00000282516 CIDEAO60543 219 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 CHRM4P08173 479 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 PFKMP08237 780 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 DPP4P27487 766 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 DOC2AQ14183 400 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 SPRYD7Q5W111 196 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 KLHDC8AQ8IYD2 350 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 SIGLECL1Q8N7X8 197 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF251Q9BRH9 671 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 ANKRD60Q9BZ19 345 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 DECR2Q9NUI1 292 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 SSUH2Q9Y2M2 353 aa8.2□□□□□ -1.1
NIPBL-201ENST00000282516 A0A1W2PP55 124 aa8.19□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF623O75123 536 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms