RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 GMFBP60983 142 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 H3F3CQ6NXT2 135 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 ETV3LQ6ZN32 361 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 RNF165Q6ZSG1 346 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 ZSCAN1Q8NBB4 408 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 BBS4Q96RK4 519 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 UBL7Q96S82 380 aaPredicted RBP11.88□□□□□ -0.51
HERC6-202ENST00000273960 PTDSS2Q9BVG9 487 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 CACYBPQ9HB71 228 aaKnown RBP11.88□□□□□ -0.51
HERC6-202ENST00000273960 MYEF2Q9P2K5 600 aaKnown RBP11.88□□□□□ -0.51
HERC6-202ENST00000273960 OPN4Q9UHM6 478 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 GNG8Q9UK08 70 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 FAM96BQ9Y3D0 163 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 KDM4EB2RXH2 506 aaPredicted RBP11.88□□□□□ -0.51
HERC6-202ENST00000273960 FADS1O60427 444 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 GALR3O60755 368 aaPredicted RBP11.88□□□□□ -0.51
HERC6-202ENST00000273960 SAGP10523 405 aaPredicted RBP11.88□□□□□ -0.51
HERC6-202ENST00000273960 UGT2B7P16662 529 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 CSF2RBP32927 897 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 CD70P32970 193 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 NPBWR1P48145 328 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 NCBP2P52298 156 aaKnown RBP eCLIP11.88□□□□□ -0.51
HERC6-202ENST00000273960 GUCA2AQ02747 115 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 NDUFAF6Q330K2 333 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 LYPLAL1Q5VWZ2 237 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 SLC8B1Q6J4K2 584 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 MUC20Q8N307 709 aaPredicted RBP11.88□□□□□ -0.51
HERC6-202ENST00000273960 CYB5D2Q8WUJ1 264 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 SLC19A3Q9BZV2 496 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 PCOLCE2Q9UKZ9 415 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 PCDHB10Q9UN67 800 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 OR2T1O43869 369 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 STX11O75558 287 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 POP7O75817 140 aaKnown RBP11.88□□□□□ -0.51
HERC6-202ENST00000273960 GKN3PP0CG01 181 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 IFNGR1P15260 489 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 NPPBP16860 134 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 SMCO1Q147U7 214 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 AGERQ15109 404 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 PCGF3Q3KNV8 242 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 IKBIPQ70UQ0 350 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 TMEM17Q86X19 198 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 TMEM151BQ8IW70 566 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 OR2T33Q8NG76 320 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 PHOSPHO1Q8TCT1 267 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 RXFP4Q8TDU9 374 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 THEM6Q8WUY1 208 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 SMIM4Q8WVI0 70 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 TCEAL4Q96EI5 215 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 IL21RQ9HBE5 538 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 MEPEQ9NQ76 525 aaPredicted RBP11.88□□□□□ -0.51
HERC6-202ENST00000273960 NPDC1Q9NQX5 325 aaPredicted RBP11.88□□□□□ -0.51
HERC6-202ENST00000273960 SCN3AQ9NY46 2000 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 TRAV27A0A087WT01 109 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 OR6C76A6NM76 312 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 SLC25A12O75746 678 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 FGF18O76093 207 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 ATP1B1P05026 303 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 GSTM3P21266 225 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 PSMB5P28074 263 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 CTNNB1P35222 781 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 RNLSQ5VYX0 342 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 OTPQ5XKR4 325 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 Q6ZVU0 165 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 OR52N1Q8NH53 320 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 GOT1L1Q8NHS2 421 aaPredicted RBP11.87□□□□□ -0.51
HERC6-202ENST00000273960 SYNPRQ8TBG9 265 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 C10orf90Q96M02 699 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 ZNF649Q9BS31 505 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 UBQLN3Q9H347 655 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 KCNK15Q9H427 330 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 BRF2Q9HAW0 419 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 ACSS1Q9NUB1 689 aaPredicted RBP11.87□□□□□ -0.51
HERC6-202ENST00000273960 SPHK1Q9NYA1 384 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 FBXO4Q9UKT5 387 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 PLEKHA6Q9Y2H5 1048 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 A0A1B0GVT2 93 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 NPIPB8E9PQR5 432 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 TGM5O43548 720 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 ADAM11O75078 769 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 HMGN2P05204 90 aaKnown RBP11.87□□□□□ -0.51
HERC6-202ENST00000273960 RNF224P0DH78 156 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 BDKRB2P30411 391 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 HTR1FP30939 366 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 AP1S1P61966 158 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 MAT1AQ00266 395 aaKnown RBP11.87□□□□□ -0.51
HERC6-202ENST00000273960 RAB33AQ14088 237 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 SPAG16Q8N0X2 631 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 SLC44A3Q8N4M1 653 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 NEURL3Q96EH8 262 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 PRRC1Q96M27 445 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 MCHR1Q99705 422 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 ZCCHC2Q9C0B9 1178 aaKnown RBP11.87□□□□□ -0.51
HERC6-202ENST00000273960 FN3KQ9H479 309 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 ANKRD19PQ9H560 264 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 KLHL9Q9P2J3 617 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 CCL26Q9Y258 94 aa11.87□□□□□ -0.51
HERC6-202ENST00000273960 RPH3AQ9Y2J0 694 aaPredicted RBP11.87□□□□□ -0.51
HERC6-202ENST00000273960 F5H0A9 414 aaPredicted RBP11.87□□□□□ -0.51
HERC6-202ENST00000273960 FCMRO60667 390 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms