RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 ASB6Q9NWX5 421 aa15.32■□□□□ 0.04
VPS54-201ENST00000272322 NUP210Q8TEM1 1887 aaPredicted RBP15.32■□□□□ 0.04
VPS54-201ENST00000272322 A6NCN8 305 aa15.32■□□□□ 0.04
VPS54-201ENST00000272322 ACOD1A6NK06 481 aa15.32■□□□□ 0.04
VPS54-201ENST00000272322 KLF4O43474 513 aa15.32■□□□□ 0.04
VPS54-201ENST00000272322 AKR7A2O43488 359 aa15.32■□□□□ 0.04
VPS54-201ENST00000272322 ZNHIT3Q15649 155 aaPredicted RBP15.32■□□□□ 0.04
VPS54-201ENST00000272322 MCATQ8IVS2 390 aaKnown RBP15.32■□□□□ 0.04
VPS54-201ENST00000272322 ABHD4Q8TB40 342 aa15.32■□□□□ 0.04
VPS54-201ENST00000272322 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.32■□□□□ 0.04
VPS54-201ENST00000272322 OR14A2Q96R54 314 aa15.32■□□□□ 0.04
VPS54-201ENST00000272322 NDEL1Q9GZM8 345 aa15.32■□□□□ 0.04
VPS54-201ENST00000272322 ABCG5Q9H222 651 aa15.32■□□□□ 0.04
VPS54-201ENST00000272322 BRINP1O60477 761 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 DOK2O60496 412 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 NUDT14O95848 222 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 SMIM10L1P0DMW3 83 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 DRD5P21918 477 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 TALDO1P37837 337 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 BCL2L15Q5TBC7 163 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 GPR135Q8IZ08 494 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 ZDHHC1Q8WTX9 485 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 SMIM10Q96HG1 83 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 LMAN2LQ9H0V9 348 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 BRD7Q9NPI1 651 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 ZMIZ1Q9ULJ6 1067 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 GTF2A1LQ9UNN4 478 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 TMEM184BQ9Y519 407 aaPredicted RBP15.31■□□□□ 0.04
VPS54-201ENST00000272322 PCDH15Q96QU1 1955 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 A0A0J9YY10 115 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 ZNF3P17036 446 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 PPP3R1P63098 170 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 CEBPEQ15744 281 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 DEFB133Q30KQ1 61 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 Q5BKY6 102 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 CBLN3Q6UW01 205 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 KANSL1Q7Z3B3 1105 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 GDPD1Q8N9F7 314 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 ZNF671Q8TAW3 534 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 NT5CQ8TCD5 201 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 PCNPQ8WW12 178 aaKnown RBP15.31■□□□□ 0.04
VPS54-201ENST00000272322 DNAJA4Q8WW22 397 aaPredicted RBP15.31■□□□□ 0.04
VPS54-201ENST00000272322 SLC7A6Q92536 515 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 MRPL38Q96DV4 380 aaKnown RBP15.31■□□□□ 0.04
VPS54-201ENST00000272322 DHCR7Q9UBM7 475 aaKnown RBP15.31■□□□□ 0.04
VPS54-201ENST00000272322 ZNF223Q9UK11 482 aaPredicted RBP15.31■□□□□ 0.04
VPS54-201ENST00000272322 TRAPPC4Q9Y296 219 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 TVP23AA6NH52 213 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 RGS9O75916 674 aaPredicted RBP15.31■□□□□ 0.04
VPS54-201ENST00000272322 MT-ND5P03915 603 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 PRKAR1AP10644 381 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 MGAT2Q10469 447 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 EIF2B5Q13144 721 aaKnown RBP15.31■□□□□ 0.04
VPS54-201ENST00000272322 SLC25A30Q5SVS4 291 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 PHOSPHO1Q8TCT1 267 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 ABHD1Q96SE0 405 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 GSDMCQ9BYG8 508 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 FKRPQ9H9S5 495 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 FOLH1BQ9HBA9 442 aa15.31■□□□□ 0.04
VPS54-201ENST00000272322 ZDBF2Q9HCK1 2354 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 TFPIP10646 304 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 TSFMP43897 325 aaKnown RBP15.3■□□□□ 0.04
VPS54-201ENST00000272322 KIAA1024LP59773 190 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 FHL5Q5TD97 284 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 ZNF655Q8N720 491 aaPredicted RBP15.3■□□□□ 0.04
VPS54-201ENST00000272322 TRMT10AQ8TBZ6 339 aaKnown RBP15.3■□□□□ 0.04
VPS54-201ENST00000272322 LMX1AQ8TE12 382 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 KISS1RQ969F8 398 aaPredicted RBP15.3■□□□□ 0.04
VPS54-201ENST00000272322 SARGQ9BW04 601 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 PPP1R3EQ9H7J1 279 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 ACOXLQ9NUZ1 547 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 APBB3O95704 486 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 AGR2O95994 175 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 TFP02787 698 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 HES5Q5TA89 166 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 OR5M10Q6IEU7 315 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 SAMD14Q8IZD0 417 aaPredicted RBP15.3■□□□□ 0.04
VPS54-201ENST00000272322 HSD17B8Q92506 261 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 HSPA12BQ96MM6 686 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 IRGMA1A4Y4 181 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 ATP1B1P05026 303 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 ZSWIM7Q19AV6 140 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 LNX2Q8N448 690 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 BMPERQ8N8U9 685 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 C16orf52Q8NHV5 167 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 WDFY2Q96P53 400 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 CMC2Q9NRP2 79 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 DUSP22Q9NRW4 184 aa15.3■□□□□ 0.04
VPS54-201ENST00000272322 HCN1O60741 890 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 PLGP00747 810 aaPredicted RBP15.29■□□□□ 0.04
VPS54-201ENST00000272322 IGHV4-34P06331 123 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 FGF9P31371 208 aaPredicted RBP15.29■□□□□ 0.04
VPS54-201ENST00000272322 AQP2P41181 271 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 AGFG1P52594 562 aaKnown RBP15.29■□□□□ 0.04
VPS54-201ENST00000272322 ZNF85Q03923 595 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 NPSR1Q6W5P4 371 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 TTLL10Q6ZVT0 673 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 TMEM151BQ8IW70 566 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 MOSPD2Q8NHP6 518 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 CEP76Q8TAP6 659 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms