RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 OR5B2Q96R09 309 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 KRTAP4-12Q9BQ66 201 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 DUSP26Q9BV47 211 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 BHLHE41Q9C0J9 482 aaPredicted RBP7.87□□□□□ -1.15
TPM3-201ENST00000271850 OR11A1Q9GZK7 315 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 C20orf27Q9GZN8 174 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 HOXD1Q9GZZ0 328 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 HHATLQ9HCP6 504 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 TIGARQ9NQ88 270 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 CTPS2Q9NRF8 586 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 MALRD1Q5VYJ5 2156 aa7.87□□□□□ -1.15
TPM3-201ENST00000271850 NBEAL1Q6ZS30 2694 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 ARFGEF3Q5TH69 2177 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 TMEM114B3SHH9 223 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 GTPBP1O00178 669 aaKnown RBP7.86□□□□□ -1.15
TPM3-201ENST00000271850 ANKRD28O15084 1053 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 SSX4O60224 188 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 LY6HO94772 140 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 CHEK2O96017 543 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 UBTFL6P0CB48 400 aaPredicted RBP7.86□□□□□ -1.15
TPM3-201ENST00000271850 DDX5P17844 614 aaKnown RBP7.86□□□□□ -1.15
TPM3-201ENST00000271850 MATN1P21941 496 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 SLC7A1P30825 629 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 TTKP33981 857 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 H3F3AP84243 136 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 MERTKQ12866 999 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 CBFBQ13951 182 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 ARHGAP11BQ3KRB8 267 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 ATP6AP1LQ52LC2 224 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 EMBQ6PCB8 327 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 C6orf120Q7Z4R8 191 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 ADGRG3Q86Y34 549 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 CCDC103Q8IW40 242 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 ZNF525Q8N782 197 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 EIF1ADQ8N9N8 165 aaKnown RBP7.86□□□□□ -1.15
TPM3-201ENST00000271850 FNDC5Q8NAU1 212 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 TOR1AIP2Q8NFQ8 470 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 OR52E4Q8NGH9 312 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 OR52N5Q8NH56 324 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 MIPOL1Q8TD10 442 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 ST8SIA1Q92185 356 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 REXO5Q96IC2 774 aaKnown RBP7.86□□□□□ -1.15
TPM3-201ENST00000271850 CACNG6Q9BXT2 260 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 AMBRA1Q9C0C7 1298 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 IQCGQ9H095 443 aaKnown RBP7.86□□□□□ -1.15
TPM3-201ENST00000271850 SAP130Q9H0E3 1048 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 OR51I1Q9H343 314 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 FANCFQ9NPI8 374 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 YAE1D1Q9NRH1 226 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 ACER3Q9NUN7 267 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 ASIC5Q9NY37 505 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 LGALS13Q9UHV8 139 aa7.86□□□□□ -1.15
TPM3-201ENST00000271850 FAF1Q9UNN5 650 aaPredicted RBP7.86□□□□□ -1.15
TPM3-201ENST00000271850 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.85□□□□□ -1.158e-7■■■■□ 20.9
TPM3-201ENST00000271850 RNF103-CHMP3A0A140T963 221 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 ZC3H12DA2A288 527 aaKnown RBP7.85□□□□□ -1.15
TPM3-201ENST00000271850 FAM234BA2RU67 622 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 ELOA3DA6NLF2 546 aaPredicted RBP7.85□□□□□ -1.15
TPM3-201ENST00000271850 H3BNH8 94 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 AP3D1O14617 1153 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 TLX2O43763 284 aaPredicted RBP7.85□□□□□ -1.15
TPM3-201ENST00000271850 TYROBPO43914 113 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 CYP7B1O75881 506 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 CSTAP01040 98 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 BPGMP07738 259 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 OR12D1P0DN82 309 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 IMPDH2P12268 514 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 GGT1P19440 569 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 PRPS1L1P21108 318 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 CD40P25942 277 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 MAPK1P28482 360 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 SOAT1P35610 550 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 ZNF83P51522 516 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 SLC16A1P53985 500 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 CLDN8P56748 225 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 SRSF2Q01130 221 aaKnown RBP7.85□□□□□ -1.15
TPM3-201ENST00000271850 PDK3Q15120 406 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 MAPK11Q15759 364 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 GABRA6Q16445 453 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 MST1LQ2TV78 715 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 TMEM249Q2WGJ8 235 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 ELOA3BQ3SY89 546 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 SPDYE7PQ495Y7 208 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 FBXW9Q5XUX1 488 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 TNFAIP8L2Q6P589 184 aaPredicted RBP7.85□□□□□ -1.15
TPM3-201ENST00000271850 GALNT5Q7Z7M9 940 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 MTDHQ86UE4 582 aaKnown RBP7.85□□□□□ -1.15
TPM3-201ENST00000271850 ANKRD46Q86W74 232 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 CNPY4Q8N129 248 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 ELOA3Q8NG57 546 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 KIF18AQ8NI77 898 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 RAB8BQ92930 207 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 MOAP1Q96BY2 351 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 PKNOX2Q96KN3 472 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 SLC35G5Q96KT7 338 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 TEX37Q96LM6 180 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 PPP1R36Q96LQ0 422 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 MANSC1Q9H8J5 431 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 PPCSQ9HAB8 311 aa7.85□□□□□ -1.15
TPM3-201ENST00000271850 MALT1Q9UDY8 824 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms